Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MIR570-201ENST00000384917 97 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 RNA5SP372-201ENST00000390836 115 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 RPL21P3-201ENST00000395517 478 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 RNU7-141P-201ENST00000459304 62 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 RPL7AP28-201ENST00000464513 571 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 IGLL4P-201ENST00000614590 133 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DNMT3AQ9Y6K1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 RNU1-62P-201ENST00000362599 164 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 RNU6-799P-201ENST00000363567 107 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 RNA5SP366-201ENST00000365454 123 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 SNORA62-201ENST00000365493 153 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 MIR549A-201ENST00000385268 96 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 RNU6-750P-201ENST00000390946 107 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 MIR889-201ENST00000401280 79 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 AP000567.1-201ENST00000406413 156 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 RNU2-49P-201ENST00000410666 184 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 snoU13.14-201ENST00000459372 104 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 UQCRHP4-201ENST00000471686 272 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 AL034555.1-201ENST00000604816 211 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 AL022345.2-201ENST00000606307 135 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 U4atac.1-201ENST00000618345 95 ntBASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
DNMT3AQ9Y6K1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 CALM2P4-201ENST00000430810 426 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 RPL23AP62-201ENST00000463396 453 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 AC141557.1-201ENST00000540982 400 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 MIR5688-201ENST00000580619 83 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 AC114781.5-201ENST00000615297 108 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 AC011944.2-201ENST00000624440 683 ntBASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DNMT3AQ9Y6K1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 RNA5SP28-201ENST00000363841 119 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 Y_RNA.437-201ENST00000384113 113 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AL157831.1-201ENST00000426134 473 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AL353689.1-201ENST00000438895 199 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 SNRPGP8-201ENST00000454064 226 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AC091167.1-201ENST00000492017 396 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 PARP4P3-201ENST00000510265 317 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AC027176.1-201ENST00000560204 514 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AC025281.1-201ENST00000567026 265 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 AC016588.2-201ENST00000632484 3021 ntBASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DNMT3AQ9Y6K1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 RNU6-727P-201ENST00000363592 107 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 SNORA18.3-201ENST00000384122 132 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 HDGFP1-201ENST00000405943 252 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 SNORA79-201ENST00000408376 140 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 RPL23AP52-201ENST00000439311 478 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 MIR3138-201ENST00000585238 82 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 IPO5P1-202ENST00000600039 287 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 AL138721.1-201ENST00000616756 179 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 MIR3653-201ENST00000625572 110 ntBASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DNMT3AQ9Y6K1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms