Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AL591623.2-201ENST00000449978 222 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 SNRPGP3-201ENST00000469405 227 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AC023141.12-201ENST00000512399 199 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AC026726.1-201ENST00000512859 601 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RNU2-35P-201ENST00000516446 142 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RNU6-1096P-201ENST00000517089 102 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 YPEL5P2-201ENST00000605553 359 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RNA5SP196-201ENST00000625967 102 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AC010733.2-201ENST00000589496 5702 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.4-201ENST00000362333 112 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 RNU6-661P-201ENST00000362409 107 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 SNORA71.3-201ENST00000362582 128 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 RNU6-1235P-201ENST00000384559 107 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 MIR520G-201ENST00000385064 90 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.621-201ENST00000411065 96 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 AC016909.1-201ENST00000415916 166 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 BX323845.1-201ENST00000432417 179 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 RPL19P16-201ENST00000433839 588 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 AL162591.2-201ENST00000449634 317 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 RNU6-498P-201ENST00000459468 107 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 AC098976.1-201ENST00000513014 541 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 RNU6-1006P-201ENST00000516998 103 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 FAM27D1-201ENST00000612308 341 ntBASIC4.61□□□□□ -1.67
LHX6Q9UPM6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX6Q9UPM6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AC006504.1-201ENST00000562493 3666 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 SNORD115-19-201ENST00000363098 82 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 SNORD115-18-201ENST00000363293 82 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 SNORD115-17-201ENST00000364612 82 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 U3.30-201ENST00000391308 210 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 RNA5SP241-201ENST00000391326 114 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 RPS12P18-201ENST00000442381 270 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 PTMAP3-201ENST00000447474 330 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 HMGN2P21-201ENST00000447764 270 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 PPBPP1-201ENST00000510807 373 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AC015795.1-201ENST00000513669 327 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 MIR4472-2-201ENST00000582069 67 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AC087685.1-201ENST00000587507 141 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AC004817.4-201ENST00000602396 3625 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX6Q9UPM6 AC017071.1-201ENST00000564407 2204 ntBASIC4.6□□□□□ -1.67
LHX6Q9UPM6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.94-201ENST00000363068 106 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.95-201ENST00000363079 95 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.565-201ENST00000384719 101 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 RN7SKP177-201ENST00000410567 355 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AC112771.1-201ENST00000463581 102 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 RN7SL303P-201ENST00000469773 251 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AC073413.2-201ENST00000604332 360 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AL359075.3-201ENST00000613288 217 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AC114781.5-201ENST00000615297 108 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AC091304.10-201ENST00000641554 121 ntBASIC4.59□□□□□ -1.67
LHX6Q9UPM6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LHX6Q9UPM6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LHX6Q9UPM6 AL136964.1-201ENST00000622038 2990 ntBASIC4.59□□□□□ -1.68
LHX6Q9UPM6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LHX6Q9UPM6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX6Q9UPM6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.58□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.253-201ENST00000364562 112 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms