Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1301P-201ENST00000362724 104 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-961P-201ENST00000363893 105 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU4-17P-201ENST00000365598 141 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-898P-201ENST00000365627 104 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.412-201ENST00000384001 104 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.508-201ENST00000384502 114 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.571-201ENST00000384753 98 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR186-201ENST00000384988 86 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AL357134.1-201ENST00000445848 426 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-953P-201ENST00000459154 107 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 TOMM22P6-201ENST00000465035 409 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 HMGB1P25-201ENST00000468402 607 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC108210.2-201ENST00000503681 201 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1333P-201ENST00000516162 93 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 SNORA27.4-201ENST00000516650 95 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RN7SKP49-201ENST00000516675 260 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR5692C2-201ENST00000577959 77 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR1273C-201ENST00000578669 77 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC007390.2-201ENST00000606229 3803 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.802-201ENST00000614892 130 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC073349.3-201ENST00000617616 186 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC233981.2-201ENST00000611524 1614 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-395P-201ENST00000365662 106 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.563-201ENST00000384707 108 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR10B-201ENST00000385011 110 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 SNORA40-201ENST00000388090 126 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNU6-817P-201ENST00000391083 104 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RNA5SP21-201ENST00000410917 96 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AL035461.1-201ENST00000421490 332 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AL591806.2-201ENST00000433122 173 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 Z82188.1-201ENST00000436709 154 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MRPS10P1-201ENST00000448483 130 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 RN7SKP277-201ENST00000516895 283 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 AL161629.2-201ENST00000615347 275 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 MIR6129-201ENST00000616087 109 ntBASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 OR4G2P-202ENST00000641004 1759 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.136-201ENST00000363444 102 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-17P-201ENST00000384245 107 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-318P-201ENST00000384283 103 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-18P-201ENST00000384527 107 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RPL30P13-201ENST00000418873 348 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AL627311.1-201ENST00000431514 115 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RPS15AP7-201ENST00000439294 405 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AP001025.1-201ENST00000486139 332 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC010409.1-201ENST00000487382 476 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RPL30P11-201ENST00000495304 339 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNA5SP471-201ENST00000516971 106 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC104027.1-201ENST00000521887 300 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC022441.3-201ENST00000605737 136 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 SCARNA4-201ENST00000629045 128 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.7-201ENST00000362352 102 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-227P-201ENST00000362865 103 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.355-201ENST00000365462 98 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.405-201ENST00000383979 100 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.451-201ENST00000384200 100 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1144P-201ENST00000384247 104 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.524-201ENST00000384564 100 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.542-201ENST00000384641 111 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1179P-201ENST00000384667 107 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.561-201ENST00000384694 100 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.586-201ENST00000391146 98 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU2-43P-201ENST00000410306 190 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AL117339.3-201ENST00000418733 162 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 snoU109.4-201ENST00000458953 143 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RPS26P21-201ENST00000475397 348 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RPS27AP9-201ENST00000477681 438 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.686-201ENST00000516548 134 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 RNU6-844P-201ENST00000517175 102 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 CASP1P1-201ENST00000526345 212 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC084851.1-201ENST00000529105 249 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms