Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AL392103.1-201ENST00000447000 198 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.641-201ENST00000459414 105 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RN7SL807P-201ENST00000470923 297 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AC024405.2-202ENST00000532731 184 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AP002001.1-203ENST00000534002 267 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AP002392.1-201ENST00000537692 208 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AC079598.5-201ENST00000547460 117 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RPL21P9-201ENST00000556149 474 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 MIR3922-201ENST00000585192 84 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 AC004467.1-201ENST00000615678 330 ntBASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP3Q9UKI2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1289P-201ENST00000384431 106 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.590-201ENST00000410140 107 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 NDUFB4P10-201ENST00000452541 359 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RPS3P1-201ENST00000456781 192 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 AL121594.1-201ENST00000475906 575 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-406P-201ENST00000516470 107 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 SCARNA14-201ENST00000516903 136 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 TGIF1P1-201ENST00000558095 802 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 uc_338.14-201ENST00000613162 166 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP3Q9UKI2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-545P-201ENST00000362681 104 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 SNORA72.2-201ENST00000365028 127 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 RNU2-54P-201ENST00000410299 190 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AP001324.2-201ENST00000461163 319 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-344P-201ENST00000516635 111 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 MIR7851-201ENST00000610611 160 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 AC091932.3-201ENST00000624223 323 ntBASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP3Q9UKI2 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC006504.1-201ENST00000562493 3666 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 PWAR6-201ENST00000552334 4618 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 U3.9-201ENST00000363823 204 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-746P-201ENST00000384112 109 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-662P-201ENST00000384253 104 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU1-57P-201ENST00000384491 166 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 MIR184-201ENST00000384962 84 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 MIR199A2-201ENST00000385289 110 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 SNORA48.2-201ENST00000390926 124 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC004866.1-201ENST00000411748 78 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 HMGN2P20-201ENST00000437531 273 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-191P-201ENST00000516295 94 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 Y_RNA.679-201ENST00000516416 91 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC022695.1-201ENST00000522089 237 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 DEFB131C-201ENST00000528817 165 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC072026.1-201ENST00000605023 201 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms