Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 Y_RNA.313-201ENST00000365095 103 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 MIR181B1-201ENST00000385240 110 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 SNORA26.3-201ENST00000391119 136 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC079780.1-201ENST00000428259 207 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC078817.1-201ENST00000492623 435 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 LINC00933-203ENST00000559812 219 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 MIR6868-201ENST00000611215 58 ntBASIC4.35□□□□□ -1.71
NXF1Q9UBU9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF1Q9UBU9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 RNU6-776P-201ENST00000364403 104 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 RNU6-1022P-201ENST00000365049 104 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 MIR483-201ENST00000385070 76 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 MIR320B2-201ENST00000408479 138 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 MTATP6P21-201ENST00000440681 189 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AL500522.2-201ENST00000448562 343 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 KC877373.1-201ENST00000479066 408 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 SNORA18.4-201ENST00000516440 124 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 SNORA31.16-201ENST00000516773 139 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AC068339.1-201ENST00000526965 141 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 MIR4662A-201ENST00000637499 67 ntBASIC4.34□□□□□ -1.71
NXF1Q9UBU9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NXF1Q9UBU9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 ZNF962P-201ENST00000443465 3140 ntBASIC4.34□□□□□ -1.72
NXF1Q9UBU9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NXF1Q9UBU9 AC016588.2-201ENST00000632484 3021 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 U3.15-201ENST00000365398 212 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 Y_RNA.362-201ENST00000365518 110 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 RNA5SP283-201ENST00000365604 119 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 RNU6-24P-201ENST00000384440 107 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 RNA5SP496-201ENST00000391240 109 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AL117339.2-201ENST00000430475 180 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 RPL26P9-201ENST00000457466 433 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AC103975.1-201ENST00000482506 483 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 RPL30P5-201ENST00000494923 336 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 AL161756.2-201ENST00000604597 246 ntBASIC4.33□□□□□ -1.72
NXF1Q9UBU9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NXF1Q9UBU9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 AL672296.1-201ENST00000427780 2158 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 Y_RNA.91-201ENST00000363042 107 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 SNORD74.4-201ENST00000364129 80 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 MIR200C-201ENST00000384980 68 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 MIR513A2-201ENST00000385249 127 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 RPL21P3-201ENST00000395517 478 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 AF228730.3-201ENST00000436691 102 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 RNU6-1018P-201ENST00000516577 106 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 AL049861.1-201ENST00000603130 150 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 AP003357.1-201ENST00000604497 148 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 AL021707.8-201ENST00000609428 183 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.32□□□□□ -1.72
NXF1Q9UBU9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
NXF1Q9UBU9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NXF1Q9UBU9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms