Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MKS1Q9NXB0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.93
MKS1Q9NXB0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 RNU6-318P-201ENST00000384283 103 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 SUMO1P4-201ENST00000429430 302 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 AC092427.1-202ENST00000430569 476 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 DEFB131C-201ENST00000528817 165 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 AC018630.3-201ENST00000542637 96 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 MIR3158-1-201ENST00000583596 81 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 MIR3922-201ENST00000585192 84 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 AC136443.5-201ENST00000603741 370 ntBASIC3.02□□□□□ -1.93
MKS1Q9NXB0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MKS1Q9NXB0 RNA5SP361-201ENST00000362686 118 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RNU4-50P-201ENST00000364361 141 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RNA5SP240-201ENST00000365355 128 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 SNORA18.2-201ENST00000383865 132 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 MIR329-1-201ENST00000385028 80 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 MIR1294-201ENST00000408503 142 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RNU2-63P-201ENST00000410792 194 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RNU6-1001P-201ENST00000411265 100 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 AC003685.2-201ENST00000422795 395 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 AC008155.2-201ENST00000464337 397 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 AC010469.2-201ENST00000496412 480 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 SNORA67.7-201ENST00000516664 135 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RN7SKP49-201ENST00000516675 260 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 MIR4446-201ENST00000578505 67 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RPL17P51-201ENST00000605218 238 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.01□□□□□ -1.93
MKS1Q9NXB0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.01□□□□□ -1.93
MKS1Q9NXB0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3□□□□□ -1.93
MKS1Q9NXB0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
MKS1Q9NXB0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
MKS1Q9NXB0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
MKS1Q9NXB0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
MKS1Q9NXB0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
MKS1Q9NXB0 RNU1-76P-201ENST00000362903 159 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.380-201ENST00000365663 111 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
MKS1Q9NXB0 MIR1252-201ENST00000408861 65 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 RPS29P4-201ENST00000414733 161 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3□□□□□ -1.93
MKS1Q9NXB0 AC004386.2-201ENST00000441858 148 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
MKS1Q9NXB0 MTND5P22-201ENST00000458380 195 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 AC109925.1-201ENST00000478069 331 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
MKS1Q9NXB0 RNU2-44P-201ENST00000516795 194 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 AL390123.1-201ENST00000603216 237 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 AC010999.1-201ENST00000611856 324 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 AL078596.1-201ENST00000624856 447 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 U6.92-201ENST00000636464 89 ntBASIC3□□□□□ -1.93
MKS1Q9NXB0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
MKS1Q9NXB0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MKS1Q9NXB0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 RNU1-62P-201ENST00000362599 164 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 SNORA63.7-201ENST00000365579 123 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 RNU6-26P-201ENST00000383985 107 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.459-201ENST00000384251 102 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 SNORD15B-201ENST00000384714 146 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 YME1L1P1-201ENST00000429435 297 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AC010095.1-201ENST00000443543 144 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 U8.20-201ENST00000459445 131 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 SNORA48.11-201ENST00000517015 89 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AC034114.1-201ENST00000520293 285 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AC007318.2-201ENST00000620999 243 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
MKS1Q9NXB0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.153-201ENST00000363615 91 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 RNA5SP125-201ENST00000364843 120 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 SNORA18.3-201ENST00000384122 132 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms