Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RNU6-429P-201ENST00000384582 108 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 SNORA1.3-201ENST00000384676 136 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RNU6-476P-201ENST00000384726 107 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RNU6-460P-201ENST00000391158 108 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC245047.8-201ENST00000456455 284 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
GCM1Q9NP62 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RN7SL132P-201ENST00000478131 296 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RPS26P15-201ENST00000488067 348 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RPL31P61-201ENST00000496160 376 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RNU2-56P-201ENST00000516826 190 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC127455.1-201ENST00000565496 145 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 AC244505.7-201ENST00000599675 272 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 U7.2-201ENST00000607576 63 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GCM1Q9NP62 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.32□□□□□ -1.88
GCM1Q9NP62 MIR6844-201ENST00000637122 62 ntBASIC3.32□□□□□ -1.88
GCM1Q9NP62 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GCM1Q9NP62 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GCM1Q9NP62 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GCM1Q9NP62 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 RNA5SP97-201ENST00000365006 84 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 Y_RNA.368-201ENST00000365547 113 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 MIR15B-201ENST00000385045 98 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 AL357134.1-201ENST00000445848 426 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC016925.1-201ENST00000458303 298 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 RNU7-170P-201ENST00000459303 61 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC084357.1-201ENST00000473404 255 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AIG1P1-201ENST00000503376 148 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 RNA5SP170-201ENST00000517150 101 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC090049.2-201ENST00000550377 109 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 MIR3923-201ENST00000579521 83 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
GCM1Q9NP62 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GCM1Q9NP62 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GCM1Q9NP62 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GCM1Q9NP62 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GCM1Q9NP62 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
GCM1Q9NP62 RNU6-1205P-201ENST00000363625 106 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 RNU6-1180P-201ENST00000364935 107 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 RNU6-1228P-201ENST00000391014 107 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 CBX3P9-201ENST00000402326 552 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 ACA59.2-201ENST00000517061 156 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 AC021739.1-201ENST00000559631 174 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 RN7SL703P-201ENST00000578485 302 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 SNORD11B-201ENST00000607707 90 ntBASIC3.3□□□□□ -1.88
GCM1Q9NP62 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
GCM1Q9NP62 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GCM1Q9NP62 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNU6-1255P-201ENST00000363434 112 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 Y_RNA.243-201ENST00000364481 109 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 Y_RNA.341-201ENST00000365341 102 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNU6-728P-201ENST00000365375 104 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 Y_RNA.456-201ENST00000384232 111 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNU6-1144P-201ENST00000384247 104 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 PTMAP5-201ENST00000393073 333 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RPL21P17-201ENST00000397467 475 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNU6-855P-201ENST00000410395 104 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 CYCSP48-201ENST00000417124 323 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 RPS29P7-201ENST00000439662 171 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 SNORA72.7-201ENST00000516349 94 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 RNU6-344P-201ENST00000516635 111 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 MIR2114-201ENST00000516645 80 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 Y_RNA.709-201ENST00000516952 92 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.29□□□□□ -1.88
GCM1Q9NP62 MIR4679-2-201ENST00000578358 77 ntBASIC3.29□□□□□ -1.88
GCM1Q9NP62 AC020914.4-201ENST00000597690 277 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms