Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 RNU6-859P-201ENST00000362728 107 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 SNORA12.2-201ENST00000391040 156 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1304P-201ENST00000411374 106 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 MTCO3P29-201ENST00000432119 779 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 RNA5SP490-201ENST00000517141 136 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 APOOP3-201ENST00000536787 586 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC079600.2-201ENST00000550076 130 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 MIR5701-3-201ENST00000578890 82 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 MIR5701-1-201ENST00000585138 82 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC113139.1-201ENST00000605049 239 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 RMST_6.1-201ENST00000611980 203 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 MIR5701-2-201ENST00000615634 82 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AC005562.2-201ENST00000618264 111 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AL669831.3-213ENST00000636676 183 ntBASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CHMP1AQ9HD42 AL365361.1-201ENST00000566942 3481 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC007336.1-201ENST00000576365 3828 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.405-201ENST00000383979 100 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.451-201ENST00000384200 100 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU6-17P-201ENST00000384245 107 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU6-301P-201ENST00000384277 107 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU6-18P-201ENST00000384527 107 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.524-201ENST00000384564 100 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.561-201ENST00000384694 100 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AL357139.1-201ENST00000407792 426 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC004866.1-201ENST00000411748 78 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 MTND4LP11-201ENST00000422184 280 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 USMG5P1-201ENST00000425964 177 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC105272.1-201ENST00000438604 198 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU7-14P-201ENST00000459331 62 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 FGF7P4-201ENST00000509595 295 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNA5SP282-201ENST00000516355 108 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 SCARNA16.2-201ENST00000516520 172 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU5F-4P-201ENST00000516581 114 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU2-44P-201ENST00000516795 194 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AL590705.4-201ENST00000532209 134 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC027288.2-201ENST00000553028 243 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RPS3AP23-202ENST00000574601 686 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RPL17P51-201ENST00000605218 238 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AL442067.2-201ENST00000614033 363 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 PISRT1.1-201ENST00000616930 107 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
CHMP1AQ9HD42 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.70-201ENST00000362886 110 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1188P-201ENST00000363795 107 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 SNORD115-8-201ENST00000363856 82 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1164P-201ENST00000364428 107 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 SNORD115-38-201ENST00000365037 82 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.332-201ENST00000365271 113 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 MIR153-2-201ENST00000385225 87 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1009P-201ENST00000390996 107 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC004386.2-201ENST00000441858 148 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 MTCO3P8-201ENST00000453691 755 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RN7SKP210-201ENST00000459176 261 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RPS23P5-201ENST00000495419 428 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 RNU6-58P-201ENST00000517143 103 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC104581.2-201ENST00000572227 430 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC025253.1-201ENST00000613623 543 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 AC092608.2-201ENST00000624427 218 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 BX322639.1-202ENST00000423987 2213 ntBASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
CHMP1AQ9HD42 ZNF204P-201ENST00000416749 2397 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 SNORD114-30-201ENST00000364448 72 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.263-201ENST00000364659 114 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.490-201ENST00000384413 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms