Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.533-201ENST00000384596 114 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 SNORA11.2-201ENST00000408318 127 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 MTCO2P27-201ENST00000420740 428 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RPL23AP95-201ENST00000426806 265 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 MIR2053-201ENST00000459295 91 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 AC022447.4-201ENST00000504053 364 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 AC023824.2-201ENST00000566185 400 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 MIR5696-201ENST00000578474 85 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 AC090897.2-201ENST00000581715 130 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 MIR5690-201ENST00000583739 73 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RPS15AP11-201ENST00000594193 385 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 SNRPGP17-201ENST00000603780 214 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 MIR7157-201ENST00000635801 60 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 RNU6-1227P-201ENST00000383981 107 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 RNU6-19P-201ENST00000384718 107 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 MIR521-1-201ENST00000384902 87 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 MIR218-1-201ENST00000384999 110 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 MIR147B-201ENST00000390185 80 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 USMG5P1-201ENST00000425964 177 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AL137792.2-201ENST00000443484 235 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AP001324.2-201ENST00000461163 319 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 RPS27P21-201ENST00000486977 252 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC009127.3-201ENST00000570531 403 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC009318.2-201ENST00000610917 651 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 HMGB1P24-202ENST00000615653 685 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 uc_338.22-201ENST00000622722 187 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 AC004944.1-201ENST00000517807 3059 ntBASIC2.41□□□□□ -2.02
UPF2Q9HAU5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.41□□□□□ -2.02
UPF2Q9HAU5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
UPF2Q9HAU5 RNU6-227P-201ENST00000362865 103 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU6-487P-201ENST00000365430 104 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU6-1040P-201ENST00000383974 107 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 Y_RNA.431-201ENST00000384086 102 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU6-784P-201ENST00000384330 106 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU6-748P-201ENST00000384648 107 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU6-220P-201ENST00000390919 107 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNA5SP489-201ENST00000410986 109 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 PMCHL1-202ENST00000423102 261 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 MRPS18CP6-201ENST00000423587 223 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 MTCO2P12-201ENST00000427426 682 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF2Q9HAU5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF2Q9HAU5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 IGKV3-31-201ENST00000523109 329 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 MRPS36P4-201ENST00000534436 298 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.4□□□□□ -2.03
UPF2Q9HAU5 AL159153.1-201ENST00000619688 317 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.4□□□□□ -2.03
UPF2Q9HAU5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.03
UPF2Q9HAU5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
UPF2Q9HAU5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 Y_RNA.2-201ENST00000362330 96 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 Y_RNA.123-201ENST00000363338 102 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 RNU6-529P-201ENST00000363383 104 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 RNU6-1285P-201ENST00000363480 105 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 Y_RNA.197-201ENST00000364004 102 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 Y_RNA.463-201ENST00000384271 102 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MIR544A-201ENST00000384855 91 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 RNU6-308P-201ENST00000390957 107 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AL591034.2-201ENST00000402839 359 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AL591043.1-201ENST00000432461 424 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 U8.21-201ENST00000459536 136 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.39□□□□□ -2.03
UPF2Q9HAU5 SCARNA3-201ENST00000517097 143 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MIR5701-3-201ENST00000578890 82 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MIR4765-201ENST00000585007 77 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MIR5701-1-201ENST00000585138 82 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AC022432.1-201ENST00000595739 310 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 MIR5701-2-201ENST00000615634 82 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AC007742.2-201ENST00000618226 398 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AC091925.1-201ENST00000623204 462 ntBASIC2.39□□□□□ -2.03
UPF2Q9HAU5 AC012640.5-201ENST00000623897 319 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms