Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNVU1-6-201ENST00000364688 164 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 SNORA1-201ENST00000384107 130 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AL590004.2-201ENST00000404787 371 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC004552.1-201ENST00000419089 348 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC097463.2-201ENST00000421074 142 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 RPS26P3-201ENST00000470205 348 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC090543.2-201ENST00000483963 348 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC004057.1-201ENST00000485827 348 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 COX6CP6-201ENST00000490840 228 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 RN7SL558P-201ENST00000497468 299 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 SCARNA22-201ENST00000503991 125 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
USB1Q9BQ65 RNU6-113P-201ENST00000516653 101 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC109329.2-201ENST00000519658 482 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AP003327.1-201ENST00000529684 127 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC011604.1-201ENST00000545978 196 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.23□□□□□ -1.73
USB1Q9BQ65 AC022726.1-201ENST00000587475 207 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 JPX_2.1-201ENST00000614161 69 ntBASIC4.23□□□□□ -1.73
USB1Q9BQ65 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USB1Q9BQ65 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USB1Q9BQ65 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USB1Q9BQ65 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USB1Q9BQ65 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 Y_RNA.49-201ENST00000362714 112 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 RNU6-234P-201ENST00000365229 104 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 AC008134.1-201ENST00000420943 193 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 RPL39P34-201ENST00000477141 156 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 S100A11P1-201ENST00000477525 312 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.22□□□□□ -1.73
USB1Q9BQ65 RN7SL690P-201ENST00000582087 240 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 MIR3117-201ENST00000584034 78 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 AC107294.3-201ENST00000609211 526 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.22□□□□□ -1.73
USB1Q9BQ65 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USB1Q9BQ65 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.22□□□□□ -1.73
USB1Q9BQ65 AC107068.1-201ENST00000563286 4218 ntBASIC4.22□□□□□ -1.73
USB1Q9BQ65 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USB1Q9BQ65 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.21□□□□□ -1.73
USB1Q9BQ65 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 SNORD31B-201ENST00000364977 69 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 RNU6-1240P-201ENST00000365155 104 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 RNU6-1292P-201ENST00000383856 107 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 Y_RNA.544-201ENST00000384650 113 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 RNU6-440P-201ENST00000390882 105 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 HDGFP1-201ENST00000405943 252 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 AC018634.1-201ENST00000437554 401 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 AC073264.2-201ENST00000448886 166 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 AP001880.2-201ENST00000538233 448 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 RNU6-94P-201ENST00000607728 107 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 AC013412.1-201ENST00000610687 192 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 AL137067.1-201ENST00000615933 120 ntBASIC4.21□□□□□ -1.74
USB1Q9BQ65 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USB1Q9BQ65 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
USB1Q9BQ65 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 RNU1-22P-201ENST00000363334 158 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 SNORA63.5-201ENST00000363548 123 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RNU6-418P-201ENST00000384035 107 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.2□□□□□ -1.74
USB1Q9BQ65 Z98742.2-201ENST00000431564 187 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RN7SL807P-201ENST00000470923 297 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RN7SL817P-201ENST00000480777 288 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 AC096725.1-201ENST00000514266 313 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RN7SKP43-201ENST00000516173 320 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RNU6-709P-201ENST00000517257 104 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 AP006289.1-201ENST00000538089 277 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 MIR5699-201ENST00000578903 90 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.2□□□□□ -1.74
USB1Q9BQ65 RN7SL722P-201ENST00000617780 284 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RN7SL565P-201ENST00000618246 284 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.2□□□□□ -1.74
USB1Q9BQ65 AL589743.1-201ENST00000551932 2712 ntBASIC4.2□□□□□ -1.74
USB1Q9BQ65 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USB1Q9BQ65 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USB1Q9BQ65 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC139713.2-215ENST00000641428 5037 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USB1Q9BQ65 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms