Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.06□□□□□ -2.08
CPNE1Q99829 Y_RNA.682-201ENST00000516457 100 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 AC090517.1-201ENST00000569307 266 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 RPS3AP23-202ENST00000574601 686 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.06□□□□□ -2.08
CPNE1Q99829 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 AC009318.2-201ENST00000610917 651 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.06□□□□□ -2.08
CPNE1Q99829 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.06□□□□□ -2.08
CPNE1Q99829 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPNE1Q99829 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
CPNE1Q99829 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPNE1Q99829 Y_RNA.160-201ENST00000363677 92 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 RNU6-767P-201ENST00000384132 107 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 RNU6-876P-201ENST00000391295 104 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPNE1Q99829 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 RNU2-41P-201ENST00000410991 178 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.05□□□□□ -2.08
CPNE1Q99829 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.05□□□□□ -2.08
CPNE1Q99829 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.05□□□□□ -2.08
CPNE1Q99829 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 RNA5SP490-201ENST00000517141 136 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.05□□□□□ -2.08
CPNE1Q99829 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
CPNE1Q99829 Y_RNA.99-201ENST00000363138 105 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 Y_RNA.279-201ENST00000364763 95 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 RNU6-596P-201ENST00000365395 98 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 MT-TL1-201ENST00000386347 75 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.04□□□□□ -2.08
CPNE1Q99829 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 OR2AQ1P-201ENST00000451972 200 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 RPL23AP75-201ENST00000491601 451 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 MTND5P5-201ENST00000503764 376 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 MTND5P9-201ENST00000503854 1755 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 RNU5F-4P-201ENST00000516581 114 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.04□□□□□ -2.08
CPNE1Q99829 MIR6128-201ENST00000615528 109 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AL359314.1-201ENST00000616913 261 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
CPNE1Q99829 SCARNA4-201ENST00000629045 128 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 AL133216.2-202ENST00000634512 349 ntBASIC2.04□□□□□ -2.08
CPNE1Q99829 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CPNE1Q99829 SNORD115-3-201ENST00000363100 82 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 RNU4-9P-201ENST00000364951 139 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
CPNE1Q99829 AL358453.1-201ENST00000422522 250 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 FTH1P25-201ENST00000447665 469 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 HMGN2P18-201ENST00000450680 270 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AP001486.1-201ENST00000463339 476 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 PRDX4P1-201ENST00000507189 574 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC116337.1-201ENST00000509680 687 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC026470.2-201ENST00000561492 181 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC005668.1-201ENST00000571142 476 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
CPNE1Q99829 DUXAP9-208ENST00000622815 614 ntBASIC2.03□□□□□ -2.08
CPNE1Q99829 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CPNE1Q99829 RNU6-845P-201ENST00000362578 103 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 RNU1-76P-201ENST00000362903 159 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPNE1Q99829 MIR548K-201ENST00000408406 116 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AC074085.1-201ENST00000413598 418 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.02□□□□□ -2.09
CPNE1Q99829 RPL21P111-201ENST00000418453 477 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AC027124.2-201ENST00000428249 105 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 RBMX2P4-201ENST00000441256 376 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 SNORD5.1-201ENST00000458800 75 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 RPS23P5-201ENST00000495419 428 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 RNU6-1098P-201ENST00000516772 96 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.02□□□□□ -2.09
CPNE1Q99829 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.02□□□□□ -2.09
CPNE1Q99829 MIR4273-201ENST00000582824 84 ntBASIC2.02□□□□□ -2.09
CPNE1Q99829 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.02□□□□□ -2.09
CPNE1Q99829 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
CPNE1Q99829 Y_RNA.166-201ENST00000363730 102 ntBASIC2.01□□□□□ -2.09
CPNE1Q99829 RNU6-593P-201ENST00000364716 112 ntBASIC2.01□□□□□ -2.09
CPNE1Q99829 Y_RNA.332-201ENST00000365271 113 ntBASIC2.01□□□□□ -2.09
CPNE1Q99829 MIR548F5-201ENST00000408421 86 ntBASIC2.01□□□□□ -2.09
CPNE1Q99829 U3.40-201ENST00000408706 208 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms