Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 Y_RNA.595-201ENST00000410403 105 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 RNU6-567P-201ENST00000516746 107 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AP003034.1-201ENST00000534621 422 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AC090517.1-201ENST00000569307 266 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 NIFKP6-201ENST00000598115 845 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AC063944.3-201ENST00000609969 533 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 HULC.1-201ENST00000612720 240 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 uc_338.34-201ENST00000617467 174 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
RPRD1AQ96P16 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 Y_RNA.338-201ENST00000365320 114 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 SNORA75-201ENST00000384158 137 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 FGF7P8-201ENST00000402994 292 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AC012306.1-201ENST00000423267 114 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 UBE2V1P8-201ENST00000437166 265 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 MTCO2P3-201ENST00000442543 421 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 Y_RNA.695-201ENST00000516715 107 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 DEFB131C-201ENST00000528817 165 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 SNORA59B-202ENST00000578183 701 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AC023043.2-201ENST00000589678 1026 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AC087752.4-201ENST00000605911 462 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AL158063.1-201ENST00000615349 536 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.43□□□□□ -2.18
RPRD1AQ96P16 AL159152.1-201ENST00000635019 2587 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 Y_RNA.381-201ENST00000365666 102 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 RNA5SP219-201ENST00000390940 113 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AL353193.1-201ENST00000421444 268 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.42□□□□□ -2.18
RPRD1AQ96P16 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 MTCO2P19-201ENST00000427513 598 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AC245047.4-201ENST00000433189 144 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 RNU7-138P-201ENST00000459479 64 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 RPL9P9-202ENST00000466501 579 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AL163973.1-201ENST00000484753 577 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AC108729.3-201ENST00000513484 108 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.42□□□□□ -2.18
RPRD1AQ96P16 SNORA77B-201ENST00000578179 125 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 MIR4424-201ENST00000585257 86 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 AC083806.3-201ENST00000614016 455 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
RPRD1AQ96P16 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPRD1AQ96P16 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPRD1AQ96P16 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 RNU5A-6P-201ENST00000384136 116 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 RNU6-1103P-201ENST00000384150 107 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 RNU6-1158P-201ENST00000391167 107 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC073464.1-201ENST00000429823 534 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 ATP5J2P3-201ENST00000451550 258 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 snoU13.6-201ENST00000458785 104 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 BET1P1-201ENST00000482276 359 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 SNORA14.1-201ENST00000516113 141 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 MTND4P7-201ENST00000523876 130 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC004223.2-201ENST00000590309 544 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC121247.2-201ENST00000604776 136 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 CTHRC1P1-201ENST00000605383 469 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC016727.1-205ENST00000605437 569 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AC064807.4-201ENST00000607201 407 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.41□□□□□ -2.18
RPRD1AQ96P16 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AL354950.2-201ENST00000617939 290 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 AL136221.1-201ENST00000621449 509 ntBASIC1.41□□□□□ -2.18
RPRD1AQ96P16 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RPRD1AQ96P16 AC009541.1-201ENST00000438279 2662 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-862P-201ENST00000362804 105 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-414P-201ENST00000363705 104 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 SNORA18.2-201ENST00000383865 132 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-203P-201ENST00000384038 104 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-1026P-201ENST00000384465 108 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RPL23AP36-201ENST00000413895 458 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms