Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 MAPK10-303ENST00000641324 3959 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 SNORD87-201ENST00000364849 89 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-1134P-201ENST00000365156 101 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP496-201ENST00000391240 109 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 SDHCP2-201ENST00000398565 501 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 MIR891A-201ENST00000401237 79 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 AC005300.1-201ENST00000428401 373 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 BX510359.1-201ENST00000456973 237 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 AC103975.1-201ENST00000482506 483 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 RNU1-95P-201ENST00000516357 160 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 AL138880.2-201ENST00000616214 239 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 ADAM3A-203ENST00000461344 2157 ntBASIC4.19□□□□□ -1.74
CNTNAP3BQ96NU0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.342-201ENST00000365352 113 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 MIR195-201ENST00000385194 87 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 HDGFP1-201ENST00000405943 252 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP504-201ENST00000410676 117 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP136-201ENST00000410906 107 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 CKS1BP6-201ENST00000424932 240 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 TOMM22P2-201ENST00000430735 237 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 RPL23AP52-201ENST00000439311 478 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 PGBD4P5-201ENST00000445958 426 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 AP000873.1-201ENST00000463987 400 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 RPS26P28-201ENST00000470806 348 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP49-201ENST00000516450 115 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 POLR3GP1-201ENST00000594073 261 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 AC006971.1-201ENST00000407916 4486 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 DHX9P1-201ENST00000436565 3076 ntBASIC4.18□□□□□ -1.74
CNTNAP3BQ96NU0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AL513302.2-201ENST00000562313 1842 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA63.5-201ENST00000363548 123 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AP002088.1-201ENST00000382740 395 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-1080P-201ENST00000383982 107 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA5A-201ENST00000384111 134 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AL590004.2-201ENST00000404787 371 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA19.1-201ENST00000410656 129 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC019205.3-201ENST00000424573 156 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 HMGN2P10-201ENST00000448085 265 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC107297.1-201ENST00000459991 176 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RN7SL691P-201ENST00000494487 301 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA70.12-201ENST00000516084 153 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-1299P-201ENST00000516316 100 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP153-201ENST00000516498 76 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-365P-201ENST00000517113 106 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-709P-201ENST00000517257 104 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC097639.2-201ENST00000603159 172 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AP003357.1-201ENST00000604497 148 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 MIR7975-201ENST00000619350 68 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 MIR6500-201ENST00000622700 86 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 AC007656.2-201ENST00000624902 4547 ntBASIC4.17□□□□□ -1.74
CNTNAP3BQ96NU0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.78-201ENST00000362970 110 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 SNORD96B-201ENST00000386148 79 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-279P-201ENST00000391297 101 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC004866.1-201ENST00000411748 78 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC008134.1-201ENST00000420943 193 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC115115.1-201ENST00000449927 248 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC090525.1-201ENST00000479116 478 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 COX6CP6-201ENST00000490840 228 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-344P-201ENST00000516635 111 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 MTND6P33-201ENST00000571794 183 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC090897.2-201ENST00000581715 130 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms