Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 MIR218-2-201ENST00000385006 110 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 U3.37-201ENST00000408528 213 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC004552.1-201ENST00000419089 348 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC098614.2-201ENST00000426040 255 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 RPL21P10-201ENST00000463521 490 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC010531.2-201ENST00000465012 153 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 RPS26P3-201ENST00000470205 348 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC021205.2-201ENST00000480069 347 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC090543.2-201ENST00000483963 348 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC004057.1-201ENST00000485827 348 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC139453.2-201ENST00000487255 133 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC016632.1-201ENST00000503994 196 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 ATP5EP1-201ENST00000510257 156 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 MIR3922-201ENST00000585192 84 ntBASIC4.6□□□□□ -1.67
TRIM47Q96LD4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM47Q96LD4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 RNVU1-14-201ENST00000384770 164 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 RPS26P42-201ENST00000413485 326 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AL135786.1-201ENST00000415892 214 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AC009237.8-201ENST00000445492 379 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 RPS4XP2-201ENST00000458402 793 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 RN7SL293P-201ENST00000481765 281 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 RNU6-107P-201ENST00000516643 102 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AC026421.1-201ENST00000519101 163 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 IGKV1-22-201ENST00000524313 326 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AP004607.1-201ENST00000524456 203 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AL513302.2-201ENST00000562313 1842 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 MIR7975-201ENST00000619350 68 ntBASIC4.59□□□□□ -1.67
TRIM47Q96LD4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM47Q96LD4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM47Q96LD4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM47Q96LD4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNA5SP97-201ENST00000365006 84 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 Y_RNA.528-201ENST00000384575 108 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 MIR590-201ENST00000385008 97 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNA5SP306-201ENST00000411087 107 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNA5SP31-201ENST00000411144 127 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNU2-32P-201ENST00000411193 191 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RPL39P40-201ENST00000445481 146 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RPL29P14-201ENST00000495837 428 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNU6-197P-201ENST00000516680 100 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNA5SP179-201ENST00000517284 121 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 YPEL5P3-201ENST00000547227 352 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 AC025627.2-201ENST00000576220 160 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 AC091167.4-201ENST00000605079 184 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 RNU6-94P-201ENST00000607728 107 ntBASIC4.58□□□□□ -1.68
TRIM47Q96LD4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM47Q96LD4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 MARK2P15-201ENST00000432204 2186 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 RNU6-799P-201ENST00000363567 107 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 Z85995.1-201ENST00000415547 335 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 AC073261.1-201ENST00000429409 121 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 MTATP8P2-201ENST00000435212 202 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 RPS20P22-201ENST00000473700 357 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 MRPS36P2-201ENST00000512569 299 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 SCARNA14-201ENST00000516903 136 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 AL022345.2-201ENST00000606307 135 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 RMST_8.1-201ENST00000610287 165 ntBASIC4.57□□□□□ -1.68
TRIM47Q96LD4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM47Q96LD4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM47Q96LD4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms