Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RN7SKP18-201ENST00000516005 275 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RNU6-687P-201ENST00000516443 89 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SCARNA16.4-201ENST00000516956 187 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 AL390726.5-202ENST00000564800 256 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RN7SL753P-201ENST00000581238 290 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 MIR6841-201ENST00000637129 72 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 AC083843.2-201ENST00000568248 6253 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 MIR133B-201ENST00000362210 119 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 snoU2-30.2-201ENST00000362805 70 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 RNU6-499P-201ENST00000365615 107 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 SRSF1P1-201ENST00000424058 520 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 AC244505.4-201ENST00000434905 287 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 SSXP5-201ENST00000443473 287 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 AC091912.1-201ENST00000511351 248 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 Y_RNA.681-201ENST00000516445 113 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 AP006245.2-201ENST00000522004 300 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 AP004607.2-201ENST00000533949 322 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 RNU6-90P-201ENST00000606352 106 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 MIR6886-201ENST00000619864 61 ntBASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A3Q96HJ5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 AL031595.2-201ENST00000624215 19071 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 RNA5SP335-201ENST00000363817 110 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 AC009238.2-201ENST00000431026 355 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 RNA5SP310-201ENST00000459084 116 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 PPIAP15-201ENST00000479662 484 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 MIR4489-201ENST00000578869 62 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 U6.111-201ENST00000636093 83 ntBASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A3Q96HJ5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.71□□□□□ -1.65
MS4A3Q96HJ5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
MS4A3Q96HJ5 AL133243.3-201ENST00000617415 3004 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP502-201ENST00000362694 119 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 MIR34C-201ENST00000384831 77 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 SNORD30.1-201ENST00000391309 70 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 AC060773.1-201ENST00000421698 310 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 snoU13.11-201ENST00000459219 104 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 RNU7-45P-201ENST00000459460 63 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 RNU6-70P-201ENST00000516438 60 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A3Q96HJ5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 Y_RNA.168-201ENST00000363740 102 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 SNORA32-201ENST00000384072 121 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 RPL23AP48-201ENST00000406913 488 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 BX510359.5-201ENST00000515651 304 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 Y_RNA.660-201ENST00000516002 120 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms