Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC002076.2-201ENST00000617362 122 ntBASIC4.46□□□□□ -1.7
HLA-CQ95604 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-CQ95604 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-CQ95604 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-CQ95604 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-CQ95604 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-CQ95604 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-CQ95604 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-CQ95604 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-CQ95604 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-CQ95604 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-CQ95604 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-CQ95604 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-CQ95604 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-CQ95604 snoU2_19.1-201ENST00000362361 80 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 Y_RNA.116-201ENST00000363292 103 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 RNU6-1164P-201ENST00000364428 107 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 RNU6-1336P-201ENST00000383886 109 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 SNORA72-201ENST00000384339 132 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-CQ95604 MTCO1P44-201ENST00000441935 243 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-CQ95604 SNORD65B-201ENST00000459126 73 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 RPL31P61-201ENST00000496160 376 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 RNU6-412P-201ENST00000516434 106 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 MIR5195-201ENST00000583555 115 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 MIR4753-201ENST00000585119 83 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-CQ95604 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-CQ95604 AC107068.1-201ENST00000563286 4218 ntBASIC4.45□□□□□ -1.7
HLA-CQ95604 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-CQ95604 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-CQ95604 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 RNA5SP307-201ENST00000362863 116 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RNU2-70P-201ENST00000410718 179 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RN7SKP284-201ENST00000411002 343 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-CQ95604 RPL21P10-201ENST00000463521 490 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 S100A11P1-201ENST00000477525 312 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RNA5SP20-201ENST00000515976 84 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RNU1-95P-201ENST00000516357 160 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RNU1-128P-201ENST00000516704 160 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 RNU6-1098P-201ENST00000516772 96 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-CQ95604 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-CQ95604 MIR4662B-201ENST00000579498 81 ntBASIC4.44□□□□□ -1.7
HLA-CQ95604 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HLA-CQ95604 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-CQ95604 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 RNU1-20P-201ENST00000363314 162 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 RNU1-83P-201ENST00000363426 164 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 RNU6-198P-201ENST00000384258 104 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 SNORA12-201ENST00000391162 147 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 RPL23AP46-201ENST00000438548 490 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 MTATP6P21-201ENST00000440681 189 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 HMGN2P16-201ENST00000456802 261 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 RNA5SP246-201ENST00000458909 119 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 Y_RNA.649-201ENST00000459077 103 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 AC010531.2-201ENST00000465012 153 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 RNU1-104P-201ENST00000517280 175 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-CQ95604 AC022655.2-201ENST00000577280 318 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 AC025166.1-201ENST00000612411 163 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 uc_338.4-201ENST00000616635 176 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 AC005086.4-201ENST00000623065 213 ntBASIC4.43□□□□□ -1.7
HLA-CQ95604 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-CQ95604 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HLA-CQ95604 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-CQ95604 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-CQ95604 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-CQ95604 SCN1A-220ENST00000641603 12506 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-CQ95604 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-CQ95604 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-CQ95604 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-CQ95604 AL356292.1-201ENST00000283110 373 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 Y_RNA.634-201ENST00000364811 113 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 MIR624-201ENST00000385217 97 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-CQ95604 RN7SKP156-201ENST00000410308 342 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 AC007738.1-201ENST00000413892 348 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms