Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 RNU6-58P-201ENST00000517143 103 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
ERCC4Q92889 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.38□□□□□ -1.87
ERCC4Q92889 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.38□□□□□ -1.87
ERCC4Q92889 AC096772.1-201ENST00000609146 564 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 AL359198.2-201ENST00000611836 194 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 MIR3651-201ENST00000630427 90 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
ERCC4Q92889 LINC02555-201ENST00000563933 1951 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ERCC4Q92889 Y_RNA.84-201ENST00000363011 104 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 Y_RNA.319-201ENST00000365138 92 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 RNU6-281P-201ENST00000384212 103 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 MIR487A-201ENST00000385009 80 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AL079342.1-201ENST00000401460 267 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 RNU6-1203P-201ENST00000410703 110 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 RNU2-38P-201ENST00000410856 79 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AC006028.1-201ENST00000438379 402 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 RPS15AP7-201ENST00000439294 405 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 RPL39P40-201ENST00000445481 146 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.37□□□□□ -1.87
ERCC4Q92889 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.37□□□□□ -1.87
ERCC4Q92889 snoU13.14-201ENST00000459372 104 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 TRBVB-201ENST00000477100 408 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.37□□□□□ -1.87
ERCC4Q92889 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AC093023.1-201ENST00000547375 507 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.37□□□□□ -1.87
ERCC4Q92889 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.37□□□□□ -1.87
ERCC4Q92889 AP001282.2-201ENST00000616149 309 ntBASIC3.37□□□□□ -1.87
ERCC4Q92889 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ERCC4Q92889 AL161431.1-201ENST00000618966 4205 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AC000403.1-201ENST00000613696 3585 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC4Q92889 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-1093P-201ENST00000391194 107 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-1140P-201ENST00000410517 106 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU2-25P-201ENST00000411041 191 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AC012306.1-201ENST00000423267 114 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AC012308.1-201ENST00000451232 178 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 SNRPGP7-201ENST00000469016 106 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RN7SL504P-201ENST00000494496 287 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RPS23P5-201ENST00000495419 428 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RN7SKP49-201ENST00000516675 260 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 SNORA31.16-201ENST00000516773 139 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-388P-201ENST00000517012 105 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-389P-201ENST00000517048 105 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RNU6-570P-201ENST00000517051 105 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.36□□□□□ -1.87
ERCC4Q92889 MIR4659A-201ENST00000580269 81 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AC005357.1-201ENST00000588399 301 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 RPS15AP11-201ENST00000594193 385 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 Y_RNA.772-201ENST00000606692 102 ntBASIC3.36□□□□□ -1.87
ERCC4Q92889 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
ERCC4Q92889 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
ERCC4Q92889 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ERCC4Q92889 MIR335-201ENST00000362173 94 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNU6-212P-201ENST00000362642 104 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 Y_RNA.257-201ENST00000364596 102 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 MIR215-201ENST00000384858 110 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 SNORD88.1-201ENST00000408684 91 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNA5SP492-201ENST00000411330 114 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.35□□□□□ -1.87
ERCC4Q92889 snoU13.6-201ENST00000458785 104 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 AC107626.1-201ENST00000471084 183 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 AC109925.1-201ENST00000478069 331 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNU6-1023P-201ENST00000516137 106 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 RNU6-1198P-201ENST00000516904 67 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 AC012493.2-201ENST00000595083 291 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.35□□□□□ -1.87
ERCC4Q92889 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 AC005520.5-201ENST00000613926 164 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 MIR376A1-201ENST00000616574 68 ntBASIC3.35□□□□□ -1.87
ERCC4Q92889 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ERCC4Q92889 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ERCC4Q92889 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ERCC4Q92889 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ERCC4Q92889 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ERCC4Q92889 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ERCC4Q92889 MIR22-201ENST00000362190 85 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 RNA5SP361-201ENST00000362686 118 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 SNORD63-201ENST00000384262 68 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 MIR181A2-201ENST00000384863 110 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 MIR329-1-201ENST00000385028 80 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 Y_RNA.581-201ENST00000391017 97 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 UBA52P6-201ENST00000399822 382 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.34□□□□□ -1.87
ERCC4Q92889 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 362.2 ms