Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 Y_RNA.771-201ENST00000598668 102 ntBASIC3.63□□□□□ -1.83
DDX1Q92499 AL391813.1-201ENST00000603098 260 ntBASIC3.63□□□□□ -1.83
DDX1Q92499 AP001485.1-201ENST00000604799 199 ntBASIC3.63□□□□□ -1.83
DDX1Q92499 Y_RNA.789-201ENST00000622480 102 ntBASIC3.63□□□□□ -1.83
DDX1Q92499 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
DDX1Q92499 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX1Q92499 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX1Q92499 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX1Q92499 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX1Q92499 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX1Q92499 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
DDX1Q92499 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX1Q92499 RNU4-35P-201ENST00000362588 141 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 Y_RNA.81-201ENST00000362997 102 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RNA5SP197-201ENST00000363357 119 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RNA5SP139-201ENST00000364340 117 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 Y_RNA.435-201ENST00000384095 112 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RNU6-17P-201ENST00000384245 107 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RNU6-18P-201ENST00000384527 107 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
DDX1Q92499 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX1Q92499 AC006028.1-201ENST00000438379 402 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX1Q92499 RPL39P29-201ENST00000447779 157 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX1Q92499 CENPBD1P1-201ENST00000464061 469 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 AC008155.2-201ENST00000464337 397 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RPL27AP5-201ENST00000469428 449 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 RPS27P26-201ENST00000494583 239 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.62□□□□□ -1.83
DDX1Q92499 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX1Q92499 SNORD113-5-201ENST00000607261 78 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.62□□□□□ -1.83
DDX1Q92499 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX1Q92499 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX1Q92499 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX1Q92499 UBE2WP1-201ENST00000362030 340 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 Y_RNA.8-201ENST00000362353 102 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 RNU6-1141P-201ENST00000364520 107 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 Y_RNA.398-201ENST00000383952 99 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 Y_RNA.441-201ENST00000384123 112 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 RNU6-622P-201ENST00000384272 103 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 AC138623.1-201ENST00000418060 216 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 AC016700.2-201ENST00000446011 156 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX1Q92499 snoU13.30-201ENST00000458951 104 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 TOMM22P6-201ENST00000465035 409 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX1Q92499 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX1Q92499 AC090897.2-201ENST00000581715 130 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 AC108706.1-201ENST00000611053 297 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
DDX1Q92499 AC233981.2-201ENST00000611524 1614 ntBASIC3.61□□□□□ -1.83
DDX1Q92499 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
DDX1Q92499 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.61□□□□□ -1.83
DDX1Q92499 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX1Q92499 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX1Q92499 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 RNU6-222P-201ENST00000362438 107 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 RNU4-9P-201ENST00000364951 139 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 RNU6-1117P-201ENST00000384525 104 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 SNORA53-201ENST00000391141 249 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 RPL19P1-201ENST00000411635 428 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 BMS1P22-201ENST00000414726 313 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX1Q92499 MTCO1P5-201ENST00000433573 344 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX1Q92499 SNORD2.1-201ENST00000458762 69 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX1Q92499 RPL30P12-201ENST00000474666 353 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 RPL26P26-201ENST00000480251 434 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 AC093663.1-201ENST00000497190 394 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 AC107934.2-201ENST00000518653 310 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX1Q92499 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX1Q92499 AK6P2-201ENST00000549020 471 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 HSPE1P4-201ENST00000550617 308 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX1Q92499 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX1Q92499 RPL23AP88-201ENST00000605759 454 ntBASIC3.6□□□□□ -1.83
DDX1Q92499 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
DDX1Q92499 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX1Q92499 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX1Q92499 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX1Q92499 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX1Q92499 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX1Q92499 RNU6-1290P-201ENST00000362957 109 ntBASIC3.59□□□□□ -1.83
DDX1Q92499 SNORD32A-201ENST00000364805 84 ntBASIC3.59□□□□□ -1.83
DDX1Q92499 RNU6-968P-201ENST00000384076 107 ntBASIC3.59□□□□□ -1.83
DDX1Q92499 RNU2-61P-201ENST00000411069 191 ntBASIC3.59□□□□□ -1.83
DDX1Q92499 AC126124.2-201ENST00000413542 321 ntBASIC3.59□□□□□ -1.83
DDX1Q92499 AC078809.1-201ENST00000427601 140 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms