Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 RNU5E-3P-201ENST00000515913 68 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 SNORA31.23-201ENST00000517219 133 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AC008011.1-201ENST00000545989 227 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 MTND5P34-201ENST00000568888 325 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 MIR3200-201ENST00000580767 85 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 AL391903.3-201ENST00000612158 163 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 MIR6134-201ENST00000617606 109 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 MIR6844-201ENST00000637122 62 ntBASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
SHKBP1Q8TBC3 LINC02471-203ENST00000641941 4752 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-778P-201ENST00000363269 103 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-727P-201ENST00000363592 107 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 MIR491-201ENST00000384877 84 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 AC245047.8-201ENST00000456455 284 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-168P-201ENST00000516189 101 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 MIR4458-201ENST00000578872 75 ntBASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.82□□□□□ -1.8
SHKBP1Q8TBC3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-969P-201ENST00000383900 105 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 MIR15B-201ENST00000385045 98 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 MIR526A2-201ENST00000390198 65 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 FTH1P15-201ENST00000406984 280 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 TOMM22P1-201ENST00000418578 312 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 RNA5SP108-201ENST00000605921 117 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 AC012640.5-201ENST00000623897 319 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 MIR3914-2-201ENST00000637339 95 ntBASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SHKBP1Q8TBC3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RNU1-62P-201ENST00000362599 164 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-915P-201ENST00000364943 103 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 MIR483-201ENST00000385070 76 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 MT-TT-201ENST00000387460 66 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-588P-201ENST00000410281 105 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AC063976.4-201ENST00000421971 163 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 snoU13.24-201ENST00000458998 104 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AC008155.2-201ENST00000464337 397 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 RNU6-561P-201ENST00000516222 102 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 SNORA74D-201ENST00000516404 141 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 CKS1BP7-201ENST00000522230 235 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AL356575.1-201ENST00000603008 283 ntBASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
SHKBP1Q8TBC3 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 RNA5SP50-201ENST00000363731 107 ntBASIC3.79□□□□□ -1.8
SHKBP1Q8TBC3 SNORD115-30-201ENST00000364117 82 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms