Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL163973.1-201ENST00000484753 577 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-123P-201ENST00000516163 102 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-64P-201ENST00000517119 105 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC105129.3-201ENST00000605455 485 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.453-201ENST00000384223 109 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 CDK8P2-201ENST00000415020 547 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC137499.1-201ENST00000427602 88 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL353752.1-201ENST00000454946 260 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC022493.2-201ENST00000506122 481 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNA5SP255-201ENST00000516370 107 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AP000811.1-201ENST00000603803 651 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC106800.4-201ENST00000614905 153 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL049777.1-201ENST00000622740 518 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR101-1-201ENST00000362265 75 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-227P-201ENST00000362865 103 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-975P-201ENST00000384296 105 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-83P-201ENST00000384568 112 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-1257P-201ENST00000384625 110 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR520A-201ENST00000384862 85 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR10B-201ENST00000385011 110 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU2-64P-201ENST00000411315 191 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL353777.1-201ENST00000425552 326 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 CALM2P4-201ENST00000430810 426 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 NFU1P2-201ENST00000448700 469 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MTCYBP1-201ENST00000454315 1119 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC022447.4-201ENST00000504053 364 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-1225P-201ENST00000516336 65 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC136475.10-201ENST00000620253 385 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR508-201ENST00000384857 115 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC007969.2-201ENST00000441891 191 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC016632.1-201ENST00000503994 196 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 SNORA25.11-201ENST00000515935 105 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-1198P-201ENST00000516904 67 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC109446.1-201ENST00000566172 220 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC008507.2-201ENST00000588402 1176 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC012507.3-201ENST00000603556 477 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC138649.3-201ENST00000622154 254 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC009033.1-201ENST00000624279 431 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNA5SP259-201ENST00000365541 109 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-26P-201ENST00000383985 107 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-110P-201ENST00000384508 104 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL359704.1-201ENST00000411586 781 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC069282.1-201ENST00000411911 526 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC119618.1-201ENST00000434191 222 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 LINC01399-202ENST00000458450 244 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-703P-201ENST00000516946 107 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MTND3P13-201ENST00000574391 343 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MTCO2P2-201ENST00000591258 225 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC097372.5-201ENST00000623665 376 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-1123P-201ENST00000362347 106 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 FCF1P10-201ENST00000407590 479 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC112206.3-201ENST00000514578 389 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC025627.3-201ENST00000582078 182 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-777P-201ENST00000364265 104 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-1000P-201ENST00000391066 106 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL031577.2-201ENST00000404133 280 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 EIF1P1-201ENST00000421436 341 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL133373.1-201ENST00000497098 94 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MIR4999-201ENST00000585029 91 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC091304.9-201ENST00000612091 226 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 SMIM11P1-201ENST00000369586 178 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 SNORD116-13-201ENST00000384408 92 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-809P-201ENST00000384461 107 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-1054P-201ENST00000411293 104 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC010099.3-201ENST00000423896 409 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC010975.2-201ENST00000427781 588 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL135790.2-201ENST00000437701 267 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms