Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SNORD65-201ENST00000391079 73 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AL663109.1-201ENST00000411498 844 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 USP9YP19-201ENST00000412165 485 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 USP9YP13-201ENST00000417797 480 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 MTND1P30-201ENST00000441241 901 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 RPL39P38-201ENST00000467018 153 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AC109445.1-201ENST00000512356 383 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 MIR4504-201ENST00000577413 92 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AL357094.1-201ENST00000603845 844 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AL136363.2-201ENST00000604173 851 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AC021851.1-201ENST00000608537 1082 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AC063944.3-201ENST00000609969 533 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AC013476.2-201ENST00000614456 459 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 AC093875.1-201ENST00000623688 504 ntBASIC-0.47□□□□□ -2.48
CCDC168Q8NDH2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 SNORA80D-201ENST00000384488 135 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 MIR135A2-201ENST00000384854 100 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AL136310.1-201ENST00000404926 654 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AC092170.1-201ENST00000440211 356 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AC007215.1-201ENST00000464893 276 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AC011195.1-201ENST00000578177 177 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AL022067.1-201ENST00000602426 454 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 AC011451.2-201ENST00000604303 598 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 MIR3976-201ENST00000606807 139 ntBASIC-0.47□□□□□ -2.49
CCDC168Q8NDH2 SNORD115-2-201ENST00000362842 82 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 RNU6-944P-201ENST00000364023 107 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 MIR520A-201ENST00000384862 85 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 RNU6-177P-201ENST00000411257 104 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 RAC1P6-201ENST00000423911 575 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 snoU13.27-201ENST00000459278 104 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC107027.2-201ENST00000512197 115 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC018630.3-201ENST00000542637 96 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC079416.3-201ENST00000624479 549 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 SNORA26-201ENST00000391286 122 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AL603865.2-201ENST00000401679 213 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 USP9YP22-201ENST00000438971 294 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC024589.1-201ENST00000512207 263 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 SNORA70.12-201ENST00000516084 153 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 RNU6-581P-201ENST00000516214 105 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 MIR5695-201ENST00000579717 85 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AL353997.4-201ENST00000586196 166 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 AC119674.1-220ENST00000641502 1048 ntBASIC-0.48□□□□□ -2.49
CCDC168Q8NDH2 MTND4P8-201ENST00000514997 1362 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 RNU4-66P-201ENST00000365199 138 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 SNORA24.1-201ENST00000384401 135 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 MTATP6P16-201ENST00000434543 526 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AL008629.1-201ENST00000438615 184 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 ELOCP24-201ENST00000456370 334 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC105036.1-201ENST00000566222 271 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC025678.1-201ENST00000567861 338 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 SCARNA4-202ENST00000625402 129 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 SNORD82-201ENST00000365530 70 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC123900.1-201ENST00000420390 96 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC027338.1-201ENST00000514840 825 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 RNU2-46P-201ENST00000517038 113 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AP003168.1-201ENST00000530091 307 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AL357080.1-201ENST00000617394 239 ntBASIC-0.49□□□□□ -2.49
CCDC168Q8NDH2 AL034345.1-201ENST00000407768 123 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 SNORA81-201ENST00000408493 178 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 MTND1P14-201ENST00000427400 950 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 RNU6-333P-201ENST00000459117 107 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AP002371.1-201ENST00000463604 433 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AC079140.3-201ENST00000511111 550 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AC021231.3-201ENST00000558497 370 ntBASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.5□□□□□ -2.49
CCDC168Q8NDH2 AC023824.3-201ENST00000569003 562 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms