Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 RNU6-703P-201ENST00000516946 107 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 AC008962.1-201ENST00000605729 304 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 U2.22-201ENST00000636441 106 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 U6.104-201ENST00000637979 90 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 U4.7-201ENST00000638126 106 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNE4Q8N205 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYNE4Q8N205 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYNE4Q8N205 AC022336.2-201ENST00000568966 2538 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYNE4Q8N205 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 AL391987.6-201ENST00000305671 199 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 Y_RNA.65-201ENST00000362846 100 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 RNU6-227P-201ENST00000362865 103 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 Y_RNA.269-201ENST00000364685 89 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 Y_RNA.277-201ENST00000364754 102 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 Y_RNA.478-201ENST00000384358 107 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 AL079342.1-201ENST00000401460 267 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 RNA5SP247-201ENST00000411181 105 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 AC004383.1-201ENST00000438135 289 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 SRIP1-201ENST00000489235 288 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 RRN3P3-201ENST00000549207 578 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 AC023824.2-201ENST00000566185 400 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 MIR376A1-201ENST00000616574 68 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
SYNE4Q8N205 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNE4Q8N205 Y_RNA.54-201ENST00000362766 105 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 RNU6-774P-201ENST00000363238 107 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 RNU6-884P-201ENST00000363889 107 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNE4Q8N205 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.3□□□□□ -1.88
SYNE4Q8N205 Z98742.3-201ENST00000418637 326 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AC099548.1-201ENST00000421443 426 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AL358453.1-201ENST00000422522 250 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AL591806.2-201ENST00000433122 173 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AC091874.1-201ENST00000511402 339 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 RNU6-377P-201ENST00000515965 102 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 RNU6-1338P-201ENST00000516328 91 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 SNORA81.3-201ENST00000517283 198 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AC104581.2-201ENST00000572227 430 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AL645944.1-201ENST00000603857 493 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 FTX_2.1-201ENST00000618816 94 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 U6.99-201ENST00000637524 83 ntBASIC3.3□□□□□ -1.88
SYNE4Q8N205 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNE4Q8N205 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYNE4Q8N205 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYNE4Q8N205 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYNE4Q8N205 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 MIR335-201ENST00000362173 94 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU6-280P-201ENST00000364145 104 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 Y_RNA.785-201ENST00000384290 109 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU6-937P-201ENST00000384325 106 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU6-658P-201ENST00000384606 106 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 MRPL35P1-201ENST00000404272 572 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 MIR1289-2-201ENST00000408360 111 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 MIR548H3-201ENST00000408771 118 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 SSXP4-201ENST00000451349 245 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RN7SKP210-201ENST00000459176 261 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RPS29P20-201ENST00000489592 171 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC108210.2-201ENST00000503681 201 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNA5SP320-201ENST00000516263 124 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 SCARNA24.2-201ENST00000516968 130 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 SNORA31.18-201ENST00000517043 134 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RNU6-1183P-201ENST00000517054 60 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 RN7SKP40-201ENST00000517211 242 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC109479.2-201ENST00000517842 174 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 RPL23AP78-201ENST00000599928 470 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 CTSLP2-204ENST00000629029 392 ntBASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE4Q8N205 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYNE4Q8N205 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.28□□□□□ -1.88
SYNE4Q8N205 AL157777.2-201ENST00000258070 137 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RNU6-105P-201ENST00000363909 104 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RNA5SP99-201ENST00000364020 114 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms