Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCUBE3Q8IX30 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCUBE3Q8IX30 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 AC026241.1-201ENST00000517873 2142 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 RNU1-15P-201ENST00000353977 144 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 RNU6-50P-201ENST00000362356 103 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 SNORA70.4-201ENST00000365509 134 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 RNU6-573P-201ENST00000383938 106 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 Y_RNA.549-201ENST00000384657 102 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 RNU6-440P-201ENST00000390882 105 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 VDAC1P3-201ENST00000434069 851 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 AC010598.1-201ENST00000510378 103 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 MIR2681-201ENST00000581814 105 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 AC069200.1-201ENST00000609511 323 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP196-201ENST00000625967 102 ntBASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SCUBE3Q8IX30 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 SNORD65B-201ENST00000459126 73 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 HMGN2P9-201ENST00000476875 229 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 RN7SKP43-201ENST00000516173 320 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP73-201ENST00000516744 108 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP468-201ENST00000516782 93 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 SNORD19.2-201ENST00000516978 73 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 IGLV3-26-201ENST00000520756 302 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AC006064.5-201ENST00000541782 248 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 MIR6075-201ENST00000620782 95 ntBASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SCUBE3Q8IX30 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 Y_RNA.49-201ENST00000362714 112 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RNU1-14P-201ENST00000362759 152 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP366-201ENST00000365454 123 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 MIR670-201ENST00000390142 98 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 AL139095.1-201ENST00000404326 391 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 AL353705.1-201ENST00000433468 480 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RN7SL691P-201ENST00000494487 301 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 PARP4P3-201ENST00000510265 317 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RNA5SP519-201ENST00000516480 119 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RNU6-126P-201ENST00000516685 103 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 HIGD1AP1-201ENST00000550979 275 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 HMGN2P15-201ENST00000585707 270 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 AC012493.2-201ENST00000595083 291 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 RNU6-94P-201ENST00000607728 107 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 AL442128.1-201ENST00000615151 90 ntBASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.49□□□□□ -1.69
SCUBE3Q8IX30 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 AL136360.1-201ENST00000503377 1900 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU6-655P-201ENST00000362858 107 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU6-1210P-201ENST00000363775 107 ntBASIC4.48□□□□□ -1.69
SCUBE3Q8IX30 RNU4-13P-201ENST00000364019 141 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms