Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 SNORA18.2-201ENST00000383865 132 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 RNU6-793P-201ENST00000384233 104 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 RNU6-1145P-201ENST00000384246 107 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AC004386.2-201ENST00000441858 148 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 RNA5SP341-201ENST00000516261 117 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 MIR5739-201ENST00000619803 80 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 U4.1-201ENST00000620349 87 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 MTND5P35-201ENST00000557537 1720 ntBASIC3.29□□□□□ -1.88
FNDC3BQ53EP0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.64-201ENST00000362845 102 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.143-201ENST00000363520 106 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 RNU6-130P-201ENST00000411112 103 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 PCNPP5-201ENST00000452246 481 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 RPS4XP2-201ENST00000458402 793 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 RNU2-44P-201ENST00000516795 194 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 MZT1P2-201ENST00000604387 248 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
FNDC3BQ53EP0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 RNU6-727P-201ENST00000363592 107 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL079342.1-201ENST00000401460 267 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL033519.2-201ENST00000403958 392 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 MRPL35P1-201ENST00000404272 572 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 UQCRBP2-201ENST00000447827 297 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AC090515.1-201ENST00000465295 476 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 CYCSP23-201ENST00000519781 313 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 MIR4298-201ENST00000584380 73 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL713866.2-201ENST00000603579 219 ntBASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FNDC3BQ53EP0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 RNU1-62P-201ENST00000362599 164 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 Y_RNA.222-201ENST00000364264 102 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 RNU6-806P-201ENST00000365147 105 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 Y_RNA.452-201ENST00000384202 108 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 FO393413.1-201ENST00000402892 195 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 MIR1294-201ENST00000408503 142 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 CST9LP2-201ENST00000437612 320 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 RNU6-408P-201ENST00000515910 100 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 MIR376A1-201ENST00000616574 68 ntBASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
FNDC3BQ53EP0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 RNU6-702P-201ENST00000364982 107 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 Y_RNA.556-201ENST00000384677 113 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 MIR1302-6-201ENST00000408466 90 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 IFNA11P-201ENST00000446352 526 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 AC007395.1-201ENST00000451333 677 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 CYP2C59P-201ENST00000457790 269 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 AC080013.2-201ENST00000460866 323 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 AC091179.3-201ENST00000474761 144 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 SNORA40.9-201ENST00000515895 93 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 AP003733.2-201ENST00000529409 171 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 TGIF1P1-201ENST00000558095 802 ntBASIC3.25□□□□□ -1.89
FNDC3BQ53EP0 AC004817.2-201ENST00000561794 651 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms