Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC073325.2-201ENST00000339545 159 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RNA5SP361-201ENST00000362686 118 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 Y_RNA.176-201ENST00000363815 109 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RNU6-245P-201ENST00000384020 107 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 MIR549A-201ENST00000385268 96 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 MTCYBP9-201ENST00000431021 303 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 FCF1P4-201ENST00000448326 183 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 SNORA25.14-201ENST00000516481 132 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 RN7SKP49-201ENST00000516675 260 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AC026470.2-201ENST00000561492 181 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AC090517.1-201ENST00000569307 266 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 SNRPGP20-201ENST00000604477 205 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 YPEL5P2-201ENST00000605553 359 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 AL449363.1-201ENST00000617815 186 ntBASIC3.18□□□□□ -1.9
ATP13A4Q4VNC1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 Y_RNA.47-201ENST00000362697 108 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 Y_RNA.276-201ENST00000364732 109 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 AC067942.3-201ENST00000512025 362 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 AL713866.2-201ENST00000603579 219 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 MIR3651-201ENST00000630427 90 ntBASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP13A4Q4VNC1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 MIR329-1-201ENST00000385028 80 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 BX510359.1-201ENST00000456973 237 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AC080013.2-201ENST00000460866 323 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AC023141.11-201ENST00000508864 202 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 RNU6-397P-201ENST00000516226 104 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 HSPE1P18-201ENST00000517602 280 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AC010999.1-201ENST00000611856 324 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 AC010205.1-201ENST00000616668 449 ntBASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ATP13A4Q4VNC1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
ATP13A4Q4VNC1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
ATP13A4Q4VNC1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-238P-201ENST00000363313 106 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-611P-201ENST00000384276 104 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-463P-201ENST00000384340 107 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 MIR568-201ENST00000385036 95 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RPL21P1-201ENST00000399532 476 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 SNORD12B-201ENST00000410433 91 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-130P-201ENST00000411112 103 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AC006028.1-201ENST00000438379 402 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 SNORA40.15-201ENST00000516884 107 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-897P-201ENST00000517135 105 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 MIR4659A-201ENST00000580269 81 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AC240442.1-201ENST00000616055 283 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 7SK.10-201ENST00000621414 298 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATP13A4Q4VNC1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.14□□□□□ -1.91
ATP13A4Q4VNC1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATP13A4Q4VNC1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP13A4Q4VNC1 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
ATP13A4Q4VNC1 Y_RNA.214-201ENST00000364201 112 ntBASIC3.14□□□□□ -1.91
ATP13A4Q4VNC1 SNORD32B-201ENST00000364460 84 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms