Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNRPGP20-201ENST00000604477 205 ntBASIC3.84□□□□□ -1.79
RSPO4Q2I0M5 MIR432-201ENST00000606207 94 ntBASIC3.84□□□□□ -1.79
RSPO4Q2I0M5 MIR548AY-201ENST00000617669 107 ntBASIC3.84□□□□□ -1.79
RSPO4Q2I0M5 MIR2052-201ENST00000636055 55 ntBASIC3.84□□□□□ -1.79
RSPO4Q2I0M5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RSPO4Q2I0M5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
RSPO4Q2I0M5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
RSPO4Q2I0M5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RSPO4Q2I0M5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
RSPO4Q2I0M5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RSPO4Q2I0M5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNU6-484P-201ENST00000384016 107 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 Y_RNA.587-201ENST00000391210 103 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 SNORD66.1-201ENST00000391230 76 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNU2-55P-201ENST00000411146 174 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNU2-32P-201ENST00000411193 191 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 MTATP8P2-201ENST00000435212 202 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 AC010531.2-201ENST00000465012 153 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 AC090515.1-201ENST00000465295 476 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNU7-115P-201ENST00000516433 55 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNU6-703P-201ENST00000516946 107 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 RNA5SP291-201ENST00000517222 105 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 CR383656.8-201ENST00000549046 145 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 AC025754.2-201ENST00000606491 432 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 Y_RNA.818-201ENST00000618813 71 ntBASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RSPO4Q2I0M5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 AL590004.2-201ENST00000404787 371 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 SNRPEP9-201ENST00000436794 238 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 AL021397.1-201ENST00000451806 248 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 EIF4BP1-201ENST00000554881 351 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 AL035470.1-201ENST00000622571 220 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 Z73965.1-201ENST00000623412 2297 ntBASIC3.82□□□□□ -1.8
RSPO4Q2I0M5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 RNU1-44P-201ENST00000384453 163 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 SNORA70E-201ENST00000384492 135 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 MIR1251-201ENST00000408552 70 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 PGBD4P5-201ENST00000445958 426 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 SNORA31.16-201ENST00000516773 139 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 RPL23AP97-201ENST00000568955 471 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 MIR5187-201ENST00000583479 76 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 U6.115-201ENST00000636045 103 ntBASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO4Q2I0M5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AL589743.1-201ENST00000551932 2712 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 Y_RNA.52-201ENST00000362760 96 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 SNORA63.5-201ENST00000363548 123 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 SNORD87-201ENST00000364849 89 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 CALM2P4-201ENST00000430810 426 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AC103975.1-201ENST00000482506 483 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 SNORA70.12-201ENST00000516084 153 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 RNU1-104P-201ENST00000517280 175 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 MIR3921-201ENST00000577308 85 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 POLR3GP1-201ENST00000594073 261 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AC012493.2-201ENST00000595083 291 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AC099778.2-201ENST00000610904 211 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AC006386.2-201ENST00000624491 75 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms