Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 AC004386.2-201ENST00000441858 148 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 CHEK2P4-201ENST00000450340 246 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3A1Q15459 AC107032.1-201ENST00000485945 480 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3A1Q15459 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3A1Q15459 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3A1Q15459 RN7SKP43-201ENST00000516173 320 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 RPPH1-2P-201ENST00000516688 293 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.52□□□□□ -1.85
SF3A1Q15459 AC093023.1-201ENST00000547375 507 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3A1Q15459 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.52□□□□□ -1.85
SF3A1Q15459 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3A1Q15459 VN1R91P-201ENST00000594377 169 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 AL353621.2-201ENST00000605340 133 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 AC243829.7-201ENST00000633081 225 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.52□□□□□ -1.85
SF3A1Q15459 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SF3A1Q15459 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3A1Q15459 AC000403.1-201ENST00000613696 3585 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SF3A1Q15459 U8.9-201ENST00000365667 134 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 Z82209.1-201ENST00000422141 2135 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 AC006028.1-201ENST00000438379 402 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 MTCO3P8-201ENST00000453691 755 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.51□□□□□ -1.85
SF3A1Q15459 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SF3A1Q15459 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3A1Q15459 AC022616.8-201ENST00000533569 253 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 AC018630.3-201ENST00000542637 96 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 MIR5680-201ENST00000577577 84 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.51□□□□□ -1.85
SF3A1Q15459 TCL6_2.1-201ENST00000615162 119 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
SF3A1Q15459 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.51□□□□□ -1.85
SF3A1Q15459 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SF3A1Q15459 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3A1Q15459 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3A1Q15459 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SF3A1Q15459 MTND4P1-201ENST00000457501 1466 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 Y_RNA.80-201ENST00000362996 102 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 SNORA38-201ENST00000363946 132 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 RNU6-245P-201ENST00000384020 107 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 Y_RNA.485-201ENST00000384395 102 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3A1Q15459 AC096638.1-201ENST00000444678 216 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 AC132942.1-201ENST00000486753 483 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 RN7SL633P-201ENST00000488974 297 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 RNU2-44P-201ENST00000516795 194 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 MIR2355-201ENST00000517199 87 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 DEFB131C-201ENST00000528817 165 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 GNAI2P1-201ENST00000541815 315 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SF3A1Q15459 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3A1Q15459 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SF3A1Q15459 AC007742.2-201ENST00000618226 398 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 AC138305.3-201ENST00000624988 240 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 AC005592.1-201ENST00000566527 1640 ntBASIC3.5□□□□□ -1.85
SF3A1Q15459 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SF3A1Q15459 AC073325.2-201ENST00000339545 159 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 RNU6-234P-201ENST00000365229 104 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SF3A1Q15459 AL590004.1-201ENST00000405321 300 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 RN7SKP58-201ENST00000411010 305 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 EIF1P2-201ENST00000428233 350 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 AC009238.1-201ENST00000442165 424 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 AC009237.6-201ENST00000446969 424 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.49□□□□□ -1.85
SF3A1Q15459 ANP32BP3-201ENST00000559213 706 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.49□□□□□ -1.85
SF3A1Q15459 SNORD58B-201ENST00000607313 66 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 MIR8057-201ENST00000620957 69 ntBASIC3.49□□□□□ -1.85
SF3A1Q15459 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.49□□□□□ -1.85
SF3A1Q15459 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SF3A1Q15459 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
SF3A1Q15459 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 SNORA18.3-201ENST00000384122 132 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 RNU6-1026P-201ENST00000384465 108 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 RNU6-1001P-201ENST00000411265 100 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 MTCO3P19-201ENST00000415864 321 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.48□□□□□ -1.85
SF3A1Q15459 AL139281.1-201ENST00000422120 335 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3A1Q15459 AC244505.4-201ENST00000434905 287 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3A1Q15459 SSXP5-201ENST00000443473 287 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 RPS23P5-201ENST00000495419 428 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.48□□□□□ -1.85
SF3A1Q15459 RNU6-1098P-201ENST00000516772 96 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
SF3A1Q15459 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
SF3A1Q15459 AC007536.1-201ENST00000533382 349 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 HSPE1P20-201ENST00000538133 289 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 MIR5188-201ENST00000583467 113 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 AC125232.2-201ENST00000592457 143 ntBASIC3.48□□□□□ -1.85
SF3A1Q15459 RPL17P51-201ENST00000605218 238 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms