Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZYXP1-201ENST00000617638 118 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH1Q08174 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH1Q08174 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PCDH1Q08174 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDH1Q08174 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH1Q08174 OTUD4P1-201ENST00000237841 3067 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH1Q08174 AC002546.1-201ENST00000588041 2504 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PCDH1Q08174 SPRR2C-201ENST00000290702 219 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 U3.8-201ENST00000363675 217 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU6-899P-201ENST00000363947 107 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU6-1048P-201ENST00000364054 107 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 snoU2_19.4-201ENST00000364329 80 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU4-10P-201ENST00000364383 140 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 Y_RNA.368-201ENST00000365547 113 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 SNORA67.2-201ENST00000384300 149 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 HMGN2P8-201ENST00000391458 268 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AL355497.1-201ENST00000406262 551 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU6-257P-201ENST00000410238 98 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU6-855P-201ENST00000410395 104 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 RNU6-628P-201ENST00000410675 107 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AL365496.1-201ENST00000426885 215 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PCDH1Q08174 Z75741.1-201ENST00000446793 314 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 HMGN2P7-201ENST00000456186 273 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH1Q08174 RNA5SP272-201ENST00000516095 111 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH1Q08174 MIR548X2-201ENST00000579776 100 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AL365222.1-201ENST00000614661 98 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AL591424.2-201ENST00000617023 128 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 AC010680.1-201ENST00000590024 3590 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH1Q08174 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH1Q08174 AC100821.1-201ENST00000523153 2479 ntBASIC3.75□□□□□ -1.81
PCDH1Q08174 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH1Q08174 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH1Q08174 AC069528.2-201ENST00000624849 1991 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AC026241.1-201ENST00000517873 2142 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH1Q08174 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH1Q08174 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH1Q08174 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDH1Q08174 RNU1-18P-201ENST00000363062 164 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 RNU1-57P-201ENST00000384491 166 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 RNU1-13P-201ENST00000384499 162 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AL691449.1-201ENST00000426570 421 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH1Q08174 AC112771.1-201ENST00000463581 102 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH1Q08174 AC107027.2-201ENST00000512197 115 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 HSPE1P18-201ENST00000517602 280 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH1Q08174 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH1Q08174 Y_RNA.802-201ENST00000614892 130 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 AL391261.4-201ENST00000616012 481 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 U6.115-201ENST00000636045 103 ntBASIC3.74□□□□□ -1.81
PCDH1Q08174 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PCDH1Q08174 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH1Q08174 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH1Q08174 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PCDH1Q08174 snoU2_19.1-201ENST00000362361 80 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PCDH1Q08174 Y_RNA.456-201ENST00000384232 111 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 RNA5SP38-201ENST00000410750 119 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 RNA5SP164-201ENST00000516533 110 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH1Q08174 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDH1Q08174 AL137849.1-201ENST00000604767 169 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 RNU1-30P-201ENST00000606575 163 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 AC008873.1-201ENST00000625051 138 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 RNA5SP196-201ENST00000625967 102 ntBASIC3.73□□□□□ -1.81
PCDH1Q08174 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDH1Q08174 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDH1Q08174 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH1Q08174 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH1Q08174 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH1Q08174 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH1Q08174 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH1Q08174 Y_RNA.81-201ENST00000362997 102 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 Y_RNA.341-201ENST00000365341 102 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 SNORD6-201ENST00000365444 73 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 Y_RNA.361-201ENST00000365515 120 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 SNORA48.7-201ENST00000391302 135 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 AL445584.1-201ENST00000431451 330 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDH1Q08174 AL162151.2-201ENST00000448875 158 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 AC022616.8-201ENST00000533569 253 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 AC109810.1-201ENST00000534066 224 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH1Q08174 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH1Q08174 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDH1Q08174 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms