Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX4Q06945 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX4Q06945 AC068700.1-201ENST00000565862 3754 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 AC010329.5-201ENST00000623497 2174 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 RNU6-270P-201ENST00000364131 105 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 RNA5SP42-201ENST00000364278 115 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 RNU4-10P-201ENST00000364383 140 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 Y_RNA.333-201ENST00000365274 102 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 SNORA20-201ENST00000384662 132 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 SNORD17-201ENST00000390930 237 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 PTMAP5-201ENST00000393073 333 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 CBX3P9-201ENST00000402326 552 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 AC005921.1-201ENST00000510589 286 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 RNU6-919P-201ENST00000516731 104 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX4Q06945 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
SOX4Q06945 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SOX4Q06945 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SOX4Q06945 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SOX4Q06945 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX4Q06945 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX4Q06945 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX4Q06945 Y_RNA.293-201ENST00000364908 93 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 SNORD116-14-201ENST00000383894 92 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 SNORD116-17-201ENST00000383929 92 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 SNORD116-15-201ENST00000384445 92 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 SNORA8.3-201ENST00000384679 139 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 SNORD116-19-201ENST00000384729 92 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 RNU6-376P-201ENST00000384731 106 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 MIR626-201ENST00000385032 94 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 AC005300.1-201ENST00000428401 373 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 AC074290.1-201ENST00000448883 135 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 RNU6-1211P-201ENST00000459179 105 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 AC084357.1-201ENST00000473404 255 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 RPS4XP13-201ENST00000483219 789 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 RNU5F-2P-201ENST00000516066 82 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 MIR2114-201ENST00000516645 80 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 AC011471.1-201ENST00000585766 187 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 MIR3658-201ENST00000636291 56 ntBASIC3.8□□□□□ -1.8
SOX4Q06945 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SOX4Q06945 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX4Q06945 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SOX4Q06945 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX4Q06945 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.79□□□□□ -1.8
SOX4Q06945 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SOX4Q06945 AC134026.1-201ENST00000623249 2239 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SOX4Q06945 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SOX4Q06945 Y_RNA.287-201ENST00000364853 94 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 MIR34B-201ENST00000385076 84 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX4Q06945 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SOX4Q06945 AC146507.2-201ENST00000460608 476 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 RPL31P41-201ENST00000477967 372 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 RNU6-1234P-201ENST00000516877 103 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 RNU6-579P-201ENST00000516879 102 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.79□□□□□ -1.8
SOX4Q06945 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX4Q06945 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX4Q06945 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 MIR3199-2-201ENST00000636243 86 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
SOX4Q06945 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SOX4Q06945 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SOX4Q06945 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX4Q06945 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
SOX4Q06945 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
SOX4Q06945 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.78□□□□□ -1.8
SOX4Q06945 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
SOX4Q06945 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SOX4Q06945 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.78□□□□□ -1.8
SOX4Q06945 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 RNU1-33P-201ENST00000364249 162 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 MIR539-201ENST00000365690 78 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AL031003.1-201ENST00000404229 172 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 CYCSP48-201ENST00000417124 323 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 RN7SKP83-201ENST00000516512 178 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AC109810.1-201ENST00000534066 224 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AC011602.1-201ENST00000546484 331 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AC105137.2-201ENST00000569073 466 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AC096577.2-201ENST00000611455 153 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
SOX4Q06945 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SOX4Q06945 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.78□□□□□ -1.8
SOX4Q06945 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SOX4Q06945 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SOX4Q06945 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SOX4Q06945 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.78□□□□□ -1.8
SOX4Q06945 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX4Q06945 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX4Q06945 Y_RNA.24-201ENST00000362508 103 ntBASIC3.77□□□□□ -1.81
SOX4Q06945 RNU6-199P-201ENST00000362954 107 ntBASIC3.77□□□□□ -1.81
SOX4Q06945 RNU6-1048P-201ENST00000364054 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms