Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.18□□□□□ -2.06
CDK3Q00526 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.18□□□□□ -2.06
CDK3Q00526 EIF4A1P12-201ENST00000551910 141 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AL121579.1-201ENST00000555129 305 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
CDK3Q00526 MIR3126-201ENST00000577443 74 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 MIR548S-201ENST00000581352 82 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AC116312.1-201ENST00000606841 314 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 AC005520.5-201ENST00000613926 164 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDK3Q00526 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDK3Q00526 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDK3Q00526 Y_RNA.88-201ENST00000363029 99 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 RNU6-601P-201ENST00000384540 107 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AL356432.1-201ENST00000405809 419 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
CDK3Q00526 SNORD5.1-201ENST00000458800 75 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AC087477.1-201ENST00000465747 340 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 MTND4P17-201ENST00000470444 350 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 RPL23AP75-201ENST00000491601 451 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AC026782.1-201ENST00000512952 449 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 Y_RNA.691-201ENST00000516611 103 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.17□□□□□ -2.06
CDK3Q00526 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.17□□□□□ -2.06
CDK3Q00526 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.17□□□□□ -2.06
CDK3Q00526 UBE2V2P2-201ENST00000587677 504 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AC018462.2-201ENST00000605375 395 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AL132822.1-201ENST00000617063 513 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.17□□□□□ -2.06
CDK3Q00526 MIR1248-201ENST00000629190 106 ntBASIC2.17□□□□□ -2.06
CDK3Q00526 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDK3Q00526 SNORA3A-201ENST00000364113 130 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 RNU6-593P-201ENST00000364716 112 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 RNU6-596P-201ENST00000365395 98 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 RNU6-26P-201ENST00000383985 107 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 RNU6-842P-201ENST00000384269 107 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 RNU6-174P-201ENST00000410406 106 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.16□□□□□ -2.06
CDK3Q00526 AC011494.1-201ENST00000596454 237 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 AP000654.2-201ENST00000605633 586 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.16□□□□□ -2.06
CDK3Q00526 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.16□□□□□ -2.06
CDK3Q00526 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.15□□□□□ -2.06
CDK3Q00526 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 RNU6-611P-201ENST00000384276 104 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 Y_RNA.482-201ENST00000384377 111 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 Y_RNA.533-201ENST00000384596 114 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 Y_RNA.594-201ENST00000410373 140 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 RNU6-1050P-201ENST00000410388 107 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 RN7SKP284-201ENST00000411002 343 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 EDDM3CP-201ENST00000415977 425 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 NCOR1P3-201ENST00000420479 303 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 AL358453.1-201ENST00000422522 250 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.15□□□□□ -2.07
CDK3Q00526 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.15□□□□□ -2.07
CDK3Q00526 AC090517.1-201ENST00000569307 266 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 AC009994.1-201ENST00000606889 253 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 SCARNA4-201ENST00000629045 128 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.15□□□□□ -2.07
CDK3Q00526 AC099654.5-201ENST00000636479 350 ntBASIC2.15□□□□□ -2.07
CDK3Q00526 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDK3Q00526 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDK3Q00526 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDK3Q00526 MTND4P12-201ENST00000498999 1377 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDK3Q00526 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CDK3Q00526 Y_RNA.142-201ENST00000363491 102 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 SNORA67.1-201ENST00000364749 141 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 RNU4-9P-201ENST00000364951 139 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 RNU2-41P-201ENST00000410991 178 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 Z82188.1-201ENST00000436709 154 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.14□□□□□ -2.07
CDK3Q00526 IFNA11P-201ENST00000446352 526 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 MTND4P18-201ENST00000447010 465 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK3Q00526 OR2AQ1P-201ENST00000451972 200 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK3Q00526 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
CDK3Q00526 AC132942.1-201ENST00000486753 483 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AC091951.2-201ENST00000500762 203 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK3Q00526 Y_RNA.670-201ENST00000516255 105 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 Y_RNA.708-201ENST00000516950 96 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms