Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNU2-70P-201ENST00000410718 179 ntBASIC4.49□□□□□ -1.69
USP46P62068 RPL32P34-201ENST00000486380 400 ntBASIC4.49□□□□□ -1.69
USP46P62068 RPL36AP21-201ENST00000490372 323 ntBASIC4.49□□□□□ -1.69
USP46P62068 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
USP46P62068 AC010598.1-201ENST00000510378 103 ntBASIC4.49□□□□□ -1.69
USP46P62068 PPBPP1-201ENST00000510807 373 ntBASIC4.49□□□□□ -1.69
USP46P62068 MIR4753-201ENST00000585119 83 ntBASIC4.49□□□□□ -1.69
USP46P62068 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.49□□□□□ -1.69
USP46P62068 ZYXP1-201ENST00000617638 118 ntBASIC4.49□□□□□ -1.69
USP46P62068 AC090517.3-201ENST00000625170 141 ntBASIC4.49□□□□□ -1.69
USP46P62068 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.49□□□□□ -1.69
USP46P62068 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.49□□□□□ -1.69
USP46P62068 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP46P62068 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.49□□□□□ -1.69
USP46P62068 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
USP46P62068 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
USP46P62068 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
USP46P62068 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.48□□□□□ -1.69
USP46P62068 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 RNU6-136P-201ENST00000384663 107 ntBASIC4.48□□□□□ -1.69
USP46P62068 SNORD66.1-201ENST00000391230 76 ntBASIC4.48□□□□□ -1.69
USP46P62068 RPS26P8-201ENST00000393490 348 ntBASIC4.48□□□□□ -1.69
USP46P62068 MIR1193-201ENST00000408109 78 ntBASIC4.48□□□□□ -1.69
USP46P62068 MIR1283-1-201ENST00000408494 87 ntBASIC4.48□□□□□ -1.69
USP46P62068 SNORD65B-201ENST00000459126 73 ntBASIC4.48□□□□□ -1.69
USP46P62068 RNU7-14P-201ENST00000459331 62 ntBASIC4.48□□□□□ -1.69
USP46P62068 RNA5SP20-201ENST00000515976 84 ntBASIC4.48□□□□□ -1.69
USP46P62068 MIR449C-201ENST00000516047 92 ntBASIC4.48□□□□□ -1.69
USP46P62068 RNA5SP73-201ENST00000516744 108 ntBASIC4.48□□□□□ -1.69
USP46P62068 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
USP46P62068 MIR5582-201ENST00000579697 68 ntBASIC4.48□□□□□ -1.69
USP46P62068 RNA5SP196-201ENST00000625967 102 ntBASIC4.48□□□□□ -1.69
USP46P62068 MIR492-201ENST00000638676 116 ntBASIC4.48□□□□□ -1.69
USP46P62068 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.48□□□□□ -1.69
USP46P62068 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.48□□□□□ -1.69
USP46P62068 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
USP46P62068 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
USP46P62068 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP46P62068 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP46P62068 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
USP46P62068 MIR450A1-201ENST00000362262 91 ntBASIC4.47□□□□□ -1.69
USP46P62068 RNU6-647P-201ENST00000364243 107 ntBASIC4.47□□□□□ -1.69
USP46P62068 SNORD32B-201ENST00000364460 84 ntBASIC4.47□□□□□ -1.69
USP46P62068 DYNLT3P1-201ENST00000378574 347 ntBASIC4.47□□□□□ -1.69
USP46P62068 RNU1-13P-201ENST00000384499 162 ntBASIC4.47□□□□□ -1.69
USP46P62068 MIR548A1-201ENST00000385041 97 ntBASIC4.47□□□□□ -1.69
USP46P62068 RNU6-57P-201ENST00000411348 103 ntBASIC4.47□□□□□ -1.69
USP46P62068 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
USP46P62068 AL592156.1-201ENST00000508758 304 ntBASIC4.47□□□□□ -1.69
USP46P62068 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.47□□□□□ -1.69
USP46P62068 Y_RNA.694-201ENST00000516677 117 ntBASIC4.47□□□□□ -1.69
USP46P62068 AC008739.2-201ENST00000597006 317 ntBASIC4.47□□□□□ -1.69
USP46P62068 AL021707.8-201ENST00000609428 183 ntBASIC4.47□□□□□ -1.69
USP46P62068 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP46P62068 snoZ196.1-201ENST00000625269 89 ntBASIC4.47□□□□□ -1.69
USP46P62068 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP46P62068 MAPK10-253ENST00000641010 4072 ntBASIC4.47□□□□□ -1.69
USP46P62068 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.47□□□□□ -1.69
USP46P62068 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.47□□□□□ -1.69
USP46P62068 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP46P62068 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP46P62068 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
USP46P62068 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
USP46P62068 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP46P62068 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 AC103988.1-201ENST00000566382 2177 ntBASIC4.46□□□□□ -1.7
USP46P62068 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 Y_RNA.495-201ENST00000384435 112 ntBASIC4.46□□□□□ -1.7
USP46P62068 RPS26P45-201ENST00000471748 340 ntBASIC4.46□□□□□ -1.7
USP46P62068 AC083906.5-201ENST00000503722 328 ntBASIC4.46□□□□□ -1.7
USP46P62068 AC099522.1-202ENST00000514718 367 ntBASIC4.46□□□□□ -1.7
USP46P62068 RNU6-781P-201ENST00000516377 101 ntBASIC4.46□□□□□ -1.7
USP46P62068 AC079598.5-201ENST00000547460 117 ntBASIC4.46□□□□□ -1.7
USP46P62068 AC004832.5-201ENST00000608677 401 ntBASIC4.46□□□□□ -1.7
USP46P62068 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.46□□□□□ -1.7
USP46P62068 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
USP46P62068 AC027290.2-201ENST00000623210 18662 ntBASIC4.46□□□□□ -1.7
USP46P62068 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP46P62068 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
USP46P62068 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP46P62068 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP46P62068 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.45□□□□□ -1.7
USP46P62068 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.45□□□□□ -1.7
USP46P62068 RNU6-508P-201ENST00000363231 103 ntBASIC4.45□□□□□ -1.7
USP46P62068 RNU6-1164P-201ENST00000364428 107 ntBASIC4.45□□□□□ -1.7
USP46P62068 RNA5SP22-201ENST00000365393 109 ntBASIC4.45□□□□□ -1.7
USP46P62068 RNU6-880P-201ENST00000384526 107 ntBASIC4.45□□□□□ -1.7
USP46P62068 MIR300-201ENST00000401138 83 ntBASIC4.45□□□□□ -1.7
USP46P62068 AL603914.1-201ENST00000401964 204 ntBASIC4.45□□□□□ -1.7
USP46P62068 RNA5SP511-201ENST00000410487 115 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms