Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 RN7SL20P-201ENST00000488827 297 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 RN7SKP43-201ENST00000516173 320 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 RNU2-44P-201ENST00000516795 194 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.76□□□□□ -1.97
SUMO3P55854 AP002404.1-201ENST00000532005 451 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.76□□□□□ -1.97
SUMO3P55854 AC104695.3-201ENST00000604052 296 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
SUMO3P55854 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SUMO3P55854 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
SUMO3P55854 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SUMO3P55854 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SUMO3P55854 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SUMO3P55854 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SUMO3P55854 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.75□□□□□ -1.97
SUMO3P55854 RNU1-62P-201ENST00000362599 164 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 SNORA71.1-201ENST00000364523 117 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 SNORA18.2-201ENST00000383865 132 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 SNORA54-201ENST00000384281 123 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SUMO3P55854 RNA5SP492-201ENST00000411330 114 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 AC004386.2-201ENST00000441858 148 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 MTCO3P8-201ENST00000453691 755 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.75□□□□□ -1.97
SUMO3P55854 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 AC022616.4-201ENST00000522985 181 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.75□□□□□ -1.97
SUMO3P55854 AC093023.1-201ENST00000547375 507 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
SUMO3P55854 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SUMO3P55854 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.97
SUMO3P55854 MIR4680-201ENST00000580906 66 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 AC125232.2-201ENST00000592457 143 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 RPS29P30-201ENST00000600975 111 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SUMO3P55854 AC010999.1-201ENST00000611856 324 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 MIR3651-201ENST00000630427 90 ntBASIC2.75□□□□□ -1.97
SUMO3P55854 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SUMO3P55854 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
SUMO3P55854 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SUMO3P55854 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.74□□□□□ -1.97
SUMO3P55854 Y_RNA.162-201ENST00000363683 102 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 SNORA18.3-201ENST00000384122 132 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 RNU6-738P-201ENST00000384531 106 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 MIR329-1-201ENST00000385028 80 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 RNU2-32P-201ENST00000411193 191 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.74□□□□□ -1.97
SUMO3P55854 ARL5AP4-201ENST00000430731 512 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AL445305.1-201ENST00000432577 575 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.74□□□□□ -1.97
SUMO3P55854 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 RPS23P5-201ENST00000495419 428 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 RN7SKP49-201ENST00000516675 260 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 CYCSP23-201ENST00000519781 313 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AC022616.8-201ENST00000533569 253 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 HSPE1P20-201ENST00000538133 289 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.74□□□□□ -1.97
SUMO3P55854 MIR5006-201ENST00000583027 110 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 AL162373.1-201ENST00000620433 407 ntBASIC2.74□□□□□ -1.97
SUMO3P55854 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.74□□□□□ -1.97
SUMO3P55854 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SUMO3P55854 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SUMO3P55854 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.74□□□□□ -1.97
SUMO3P55854 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SUMO3P55854 MIR148B-201ENST00000362252 99 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU1-76P-201ENST00000362903 159 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU1-23P-201ENST00000363361 144 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 Y_RNA.179-201ENST00000363844 90 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 SNORA63C-201ENST00000364578 129 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 Y_RNA.389-201ENST00000383924 113 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-1145P-201ENST00000384246 107 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-318P-201ENST00000384283 103 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RPL21P3-201ENST00000395517 478 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-985P-201ENST00000410182 104 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-101P-201ENST00000410323 104 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.73□□□□□ -1.97
SUMO3P55854 AC009237.7-201ENST00000447357 229 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 AL118496.2-201ENST00000448300 230 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 AC117440.1-201ENST00000474107 571 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-344P-201ENST00000516635 111 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 RNU6-1137P-201ENST00000517073 99 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.73□□□□□ -1.97
SUMO3P55854 DEFB131C-201ENST00000528817 165 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 AC040926.1-201ENST00000530195 238 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SUMO3P55854 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SUMO3P55854 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms