Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN1P54253 AC136932.1-201ENST00000574771 208 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 RPL23AP78-201ENST00000599928 470 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 MIR7843-201ENST00000622274 79 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN1P54253 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN1P54253 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN1P54253 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATXN1P54253 Y_RNA.240-201ENST00000364469 95 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 U8.7-201ENST00000364940 136 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNY4P28-201ENST00000365281 93 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNU6-611P-201ENST00000384276 104 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNU6-790P-201ENST00000384479 105 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.31□□□□□ -1.88
ATXN1P54253 RNU6-257P-201ENST00000410238 98 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AL030996.1-201ENST00000411430 235 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN1P54253 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AL162725.1-201ENST00000435405 301 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AL513124.1-201ENST00000450410 614 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN1P54253 TRBV12-1-201ENST00000479785 344 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN1P54253 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN1P54253 RNU5F-8P-201ENST00000515941 111 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNU6-1219P-201ENST00000516143 112 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNY3P16-201ENST00000516338 101 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 RNU6-426P-201ENST00000516464 97 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN1P54253 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN1P54253 MIR4782-201ENST00000577987 79 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 MIR3613-201ENST00000579844 87 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AC008739.2-201ENST00000597006 317 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AC008121.1-201ENST00000603244 268 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AC006254.2-201ENST00000603259 279 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 AL121917.1-203ENST00000605534 577 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 MIR1244-1-201ENST00000612829 85 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 MIR1244-3-201ENST00000635744 85 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 MIR1244-2-201ENST00000636449 85 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 MIR1244-4-202ENST00000636813 85 ntBASIC3.31□□□□□ -1.88
ATXN1P54253 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN1P54253 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATXN1P54253 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ATXN1P54253 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ATXN1P54253 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
ATXN1P54253 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN1P54253 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATXN1P54253 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN1P54253 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN1P54253 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 Y_RNA.183-201ENST00000363882 113 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 RNU6-933P-201ENST00000384424 107 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 RNU6-918P-201ENST00000391219 106 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 SNORD56-201ENST00000413522 71 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN1P54253 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 AC010095.1-201ENST00000443543 144 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 AC113155.1-201ENST00000511141 769 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.3□□□□□ -1.88
ATXN1P54253 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.3□□□□□ -1.88
ATXN1P54253 AL355877.2-201ENST00000603670 358 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 U6.106-201ENST00000636360 105 ntBASIC3.3□□□□□ -1.88
ATXN1P54253 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ATXN1P54253 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ATXN1P54253 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN1P54253 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN1P54253 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ATXN1P54253 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ATXN1P54253 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
ATXN1P54253 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 SNORD116-18-201ENST00000383961 92 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RNU6-102P-201ENST00000384485 104 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RNU6-429P-201ENST00000384582 108 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RNU6-325P-201ENST00000411132 105 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN1P54253 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RPL23AP45-201ENST00000476406 468 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RPS29P20-201ENST00000489592 171 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RNU6-1234P-201ENST00000516877 103 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 Y_RNA.713-201ENST00000517013 96 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN1P54253 TRAV32-201ENST00000553993 340 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 AC091544.4-201ENST00000555268 342 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 H3F3AP1-201ENST00000559984 334 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 AC009127.3-201ENST00000570531 403 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 MIR4524B-201ENST00000581569 115 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 UBL5P2-201ENST00000583788 219 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 TUG1_4.1-201ENST00000619464 181 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 UCA1.1-201ENST00000620952 75 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
ATXN1P54253 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN1P54253 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN1P54253 AP000560.1-201ENST00000624150 1937 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms