Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU2-44P-201ENST00000516795 194 ntBASIC3.82□□□□□ -1.8
NID1P14543 RNU1-45P-201ENST00000517191 141 ntBASIC3.82□□□□□ -1.8
NID1P14543 AC022655.2-201ENST00000577280 318 ntBASIC3.82□□□□□ -1.8
NID1P14543 AP003357.1-201ENST00000604497 148 ntBASIC3.82□□□□□ -1.8
NID1P14543 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
NID1P14543 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NID1P14543 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.82□□□□□ -1.8
NID1P14543 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.82□□□□□ -1.8
NID1P14543 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
NID1P14543 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NID1P14543 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NID1P14543 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NID1P14543 MIR372-201ENST00000362225 67 ntBASIC3.81□□□□□ -1.8
NID1P14543 SNORD114-7-201ENST00000362520 77 ntBASIC3.81□□□□□ -1.8
NID1P14543 RNA5SP513-201ENST00000364648 118 ntBASIC3.81□□□□□ -1.8
NID1P14543 RNU2-55P-201ENST00000411146 174 ntBASIC3.81□□□□□ -1.8
NID1P14543 AC069285.2-201ENST00000440210 275 ntBASIC3.81□□□□□ -1.8
NID1P14543 AC107626.1-201ENST00000471084 183 ntBASIC3.81□□□□□ -1.8
NID1P14543 AC099522.1-202ENST00000514718 367 ntBASIC3.81□□□□□ -1.8
NID1P14543 RN7SKP19-201ENST00000516016 252 ntBASIC3.81□□□□□ -1.8
NID1P14543 RNU6-781P-201ENST00000516377 101 ntBASIC3.81□□□□□ -1.8
NID1P14543 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.81□□□□□ -1.8
NID1P14543 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.81□□□□□ -1.8
NID1P14543 AC112200.1-201ENST00000625015 234 ntBASIC3.81□□□□□ -1.8
NID1P14543 RNA5SP196-201ENST00000625967 102 ntBASIC3.81□□□□□ -1.8
NID1P14543 MIR3199-2-201ENST00000636243 86 ntBASIC3.81□□□□□ -1.8
NID1P14543 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.81□□□□□ -1.8
NID1P14543 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NID1P14543 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.81□□□□□ -1.8
NID1P14543 AC004944.1-201ENST00000517807 3059 ntBASIC3.81□□□□□ -1.8
NID1P14543 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NID1P14543 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
NID1P14543 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.8□□□□□ -1.8
NID1P14543 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NID1P14543 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.8□□□□□ -1.8
NID1P14543 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.8□□□□□ -1.8
NID1P14543 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NID1P14543 SNORA67.2-201ENST00000384300 149 ntBASIC3.8□□□□□ -1.8
NID1P14543 MIR548B-201ENST00000385247 97 ntBASIC3.8□□□□□ -1.8
NID1P14543 RNA5SP239-201ENST00000410218 129 ntBASIC3.8□□□□□ -1.8
NID1P14543 RN7SKP101-201ENST00000411376 320 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.8□□□□□ -1.8
NID1P14543 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 RPL39P40-201ENST00000445481 146 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC090515.1-201ENST00000465295 476 ntBASIC3.8□□□□□ -1.8
NID1P14543 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.8□□□□□ -1.8
NID1P14543 AL160236.1-201ENST00000556317 195 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC006130.2-201ENST00000586202 326 ntBASIC3.8□□□□□ -1.8
NID1P14543 POLR3GP1-201ENST00000594073 261 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC024220.1-201ENST00000603675 484 ntBASIC3.8□□□□□ -1.8
NID1P14543 AC025166.1-201ENST00000612411 163 ntBASIC3.8□□□□□ -1.8
NID1P14543 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
NID1P14543 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NID1P14543 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NID1P14543 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.8□□□□□ -1.8
NID1P14543 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NID1P14543 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NID1P14543 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.79□□□□□ -1.8
NID1P14543 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.79□□□□□ -1.8
NID1P14543 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 ZNF962P-201ENST00000443465 3140 ntBASIC3.79□□□□□ -1.8
NID1P14543 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
NID1P14543 RNU4-15P-201ENST00000362613 141 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU6-1323P-201ENST00000384025 107 ntBASIC3.79□□□□□ -1.8
NID1P14543 MIRLET7F2-201ENST00000385277 83 ntBASIC3.79□□□□□ -1.8
NID1P14543 SNORA12.1-201ENST00000390873 148 ntBASIC3.79□□□□□ -1.8
NID1P14543 U6atac.2-201ENST00000408644 118 ntBASIC3.79□□□□□ -1.8
NID1P14543 AL161651.1-201ENST00000440882 223 ntBASIC3.79□□□□□ -1.8
NID1P14543 AC006011.1-201ENST00000442758 349 ntBASIC3.79□□□□□ -1.8
NID1P14543 HMGN2P21-201ENST00000447764 270 ntBASIC3.79□□□□□ -1.8
NID1P14543 AL358232.1-201ENST00000448030 501 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU6-437P-201ENST00000459408 95 ntBASIC3.79□□□□□ -1.8
NID1P14543 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
NID1P14543 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU6-1299P-201ENST00000516316 100 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU6-412P-201ENST00000516434 106 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
NID1P14543 RNU7-116P-201ENST00000516940 62 ntBASIC3.79□□□□□ -1.8
NID1P14543 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.79□□□□□ -1.8
NID1P14543 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.79□□□□□ -1.8
NID1P14543 AL137843.1-201ENST00000605078 385 ntBASIC3.79□□□□□ -1.8
NID1P14543 MIR7151-201ENST00000617477 60 ntBASIC3.79□□□□□ -1.8
NID1P14543 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.79□□□□□ -1.8
NID1P14543 MIR492-201ENST00000638676 116 ntBASIC3.79□□□□□ -1.8
NID1P14543 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NID1P14543 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NID1P14543 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NID1P14543 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.78□□□□□ -1.8
NID1P14543 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NID1P14543 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms