Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD8P13378 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD8P13378 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD8P13378 SNORD87-201ENST00000364849 89 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 SNORA20-201ENST00000384662 132 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 RNU6-19P-201ENST00000384718 107 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AL031003.1-201ENST00000404229 172 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 RNU6-710P-201ENST00000410424 105 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 PTGES3P4-201ENST00000426243 356 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AL137159.1-201ENST00000452808 512 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 RNU6-1211P-201ENST00000459179 105 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD8P13378 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD8P13378 RPL23AP94-201ENST00000512518 302 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AC136628.3-201ENST00000521868 290 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AC022616.8-201ENST00000533569 253 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AC025281.1-201ENST00000567026 265 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 DNAJC19P2-201ENST00000593340 302 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AL078604.3-201ENST00000615580 211 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 AC005562.2-201ENST00000618264 111 ntBASIC4.02□□□□□ -1.77
HOXD8P13378 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD8P13378 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXD8P13378 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD8P13378 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD8P13378 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
HOXD8P13378 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD8P13378 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD8P13378 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD8P13378 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD8P13378 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXD8P13378 SNORA31-201ENST00000362607 130 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 RNU6-376P-201ENST00000384731 106 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 RNU6-855P-201ENST00000410395 104 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD8P13378 NDUFB1P1-201ENST00000435191 180 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 AP000873.1-201ENST00000463987 400 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 RNU6-1333P-201ENST00000516162 93 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD8P13378 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD8P13378 MIR4513-201ENST00000581077 86 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 MIR5006-201ENST00000583027 110 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 Y_RNA.802-201ENST00000614892 130 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 AC008873.1-201ENST00000625051 138 ntBASIC4.01□□□□□ -1.77
HOXD8P13378 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD8P13378 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD8P13378 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD8P13378 LINC02471-203ENST00000641941 4752 ntBASIC4□□□□□ -1.77
HOXD8P13378 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXD8P13378 RNA5SP50-201ENST00000363731 107 ntBASIC4□□□□□ -1.77
HOXD8P13378 RNU6-454P-201ENST00000364292 107 ntBASIC4□□□□□ -1.77
HOXD8P13378 RNA5SP205-201ENST00000364653 136 ntBASIC4□□□□□ -1.77
HOXD8P13378 Y_RNA.273-201ENST00000364703 102 ntBASIC4□□□□□ -1.77
HOXD8P13378 SNORA26.5-201ENST00000391215 123 ntBASIC4□□□□□ -1.77
HOXD8P13378 RN7SKP111-201ENST00000410349 271 ntBASIC4□□□□□ -1.77
HOXD8P13378 DBIP2-201ENST00000419076 262 ntBASIC4□□□□□ -1.77
HOXD8P13378 RPL23AP82-202ENST00000427528 469 ntBASIC4□□□□□ -1.77
HOXD8P13378 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4□□□□□ -1.77
HOXD8P13378 AC074290.1-201ENST00000448883 135 ntBASIC4□□□□□ -1.77
HOXD8P13378 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4□□□□□ -1.77
HOXD8P13378 snoU13.28-201ENST00000459235 104 ntBASIC4□□□□□ -1.77
HOXD8P13378 RN7SL601P-201ENST00000471221 293 ntBASIC4□□□□□ -1.77
HOXD8P13378 RPS29P2-201ENST00000479278 136 ntBASIC4□□□□□ -1.77
HOXD8P13378 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4□□□□□ -1.77
HOXD8P13378 RN7SKP83-201ENST00000516512 178 ntBASIC4□□□□□ -1.77
HOXD8P13378 RN7SKP209-201ENST00000516888 304 ntBASIC4□□□□□ -1.77
HOXD8P13378 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4□□□□□ -1.77
HOXD8P13378 MIR3690-201ENST00000580266 75 ntBASIC4□□□□□ -1.77
HOXD8P13378 AC005520.5-201ENST00000613926 164 ntBASIC4□□□□□ -1.77
HOXD8P13378 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD8P13378 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
HOXD8P13378 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
HOXD8P13378 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4□□□□□ -1.77
HOXD8P13378 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD8P13378 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HOXD8P13378 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD8P13378 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXD8P13378 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD8P13378 Y_RNA.24-201ENST00000362508 103 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 RNU6-801P-201ENST00000364087 105 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 RNU6-270P-201ENST00000364131 105 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 Y_RNA.337-201ENST00000365312 102 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 MIR147B-201ENST00000390185 80 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 AC006461.1-201ENST00000412637 326 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 AC004386.2-201ENST00000441858 148 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 U3.44-201ENST00000458938 192 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 RPL23AP70-201ENST00000483361 460 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 MIR3609-201ENST00000582661 80 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 SCARNA15.3-201ENST00000626315 122 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 SCARNA4.1-201ENST00000628597 123 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 MIR3658-201ENST00000636291 56 ntBASIC3.99□□□□□ -1.77
HOXD8P13378 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD8P13378 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD8P13378 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD8P13378 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms