Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MIR181A1-201ENST00000385026 110 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 RNU6-332P-201ENST00000391193 108 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.79□□□□□ -2.12
SFTPBP07988 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 USP9YP28-201ENST00000435142 589 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.79□□□□□ -2.12
SFTPBP07988 RNU7-187P-201ENST00000458985 68 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 MTCO1P29-201ENST00000496868 288 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AC114801.2-201ENST00000503825 781 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.79□□□□□ -2.12
SFTPBP07988 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.79□□□□□ -2.12
SFTPBP07988 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AC005034.5-201ENST00000604219 466 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 MIR3976-201ENST00000606807 139 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.79□□□□□ -2.12
SFTPBP07988 AL136221.1-201ENST00000621449 509 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.79□□□□□ -2.12
SFTPBP07988 AC024614.3-201ENST00000637860 256 ntBASIC1.79□□□□□ -2.12
SFTPBP07988 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SFTPBP07988 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 ZNF72P-201ENST00000425869 1908 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 SNORD113-7-201ENST00000363762 77 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 Y_RNA.402-201ENST00000383972 102 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 SNORA32.2-201ENST00000384049 122 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 RNU6-933P-201ENST00000384424 107 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 Y_RNA.516-201ENST00000384541 124 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 SNORD116-4-201ENST00000384733 96 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AL023284.1-201ENST00000403956 276 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 MIR1289-2-201ENST00000408360 111 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 VN1R36P-201ENST00000414936 291 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AC123900.1-201ENST00000420390 96 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AC139712.2-201ENST00000424302 339 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPBP07988 HMGB1P18-201ENST00000438801 619 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AL035666.1-201ENST00000446195 348 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPBP07988 RNU7-66P-201ENST00000459469 62 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPBP07988 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPBP07988 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.78□□□□□ -2.12
SFTPBP07988 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.78□□□□□ -2.12
SFTPBP07988 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPBP07988 TPRKBP2-201ENST00000565969 475 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 EIF1P4-201ENST00000572664 335 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 AC098657.3-201ENST00000620434 263 ntBASIC1.78□□□□□ -2.12
SFTPBP07988 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SFTPBP07988 MIR340-201ENST00000362125 95 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 SNORA18.2-201ENST00000383865 132 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 RNU6-1286P-201ENST00000383871 107 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 RNU6-968P-201ENST00000384076 107 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 MIR549A-201ENST00000385268 96 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 RNA5SP494-201ENST00000410653 129 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AL590632.1-201ENST00000424289 371 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.77□□□□□ -2.13
SFTPBP07988 AC096745.1-201ENST00000509945 370 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 RNU6-548P-201ENST00000517083 115 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 DEFB131C-201ENST00000528817 165 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AC087441.2-201ENST00000529141 262 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AC016256.1-201ENST00000547971 354 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 CPDP1-201ENST00000579660 283 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.77□□□□□ -2.13
SFTPBP07988 MIR8076-201ENST00000611401 83 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
SFTPBP07988 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SFTPBP07988 RNU1-76P-201ENST00000362903 159 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 RNU5B-2P-201ENST00000363036 113 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 Y_RNA.151-201ENST00000363566 112 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 RNU4-12P-201ENST00000365233 139 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 RNU6-128P-201ENST00000383976 107 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.76□□□□□ -2.13
SFTPBP07988 AC027124.2-201ENST00000428249 105 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 MTCO3P18-201ENST00000440206 761 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 AC130509.1-201ENST00000464158 433 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 RPS23P5-201ENST00000495419 428 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 MRPS17P9-201ENST00000511924 393 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 AP005639.2-201ENST00000527592 928 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SFTPBP07988 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.76□□□□□ -2.13
SFTPBP07988 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.76□□□□□ -2.13
SFTPBP07988 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
SFTPBP07988 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.76□□□□□ -2.13
SFTPBP07988 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.76□□□□□ -2.13
SFTPBP07988 AL133215.3-201ENST00000609801 448 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 AL353997.5-201ENST00000618886 171 ntBASIC1.76□□□□□ -2.13
SFTPBP07988 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
SFTPBP07988 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SFTPBP07988 Y_RNA.9-201ENST00000362354 101 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 RNY4P14-201ENST00000363656 96 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 RNU6-1026P-201ENST00000384465 108 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms