Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 MTND5P18-201ENST00000445624 1801 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 RNU6-508P-201ENST00000363231 103 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RNU6-1107P-201ENST00000364817 104 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 Y_RNA.328-201ENST00000365208 113 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 HMGN2P32-201ENST00000444648 269 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 AC117454.1-201ENST00000491120 168 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RN7SKP46-201ENST00000515942 234 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RNU7-115P-201ENST00000516433 55 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RNA5SP164-201ENST00000516533 110 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RN7SKP57-201ENST00000517248 293 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 AL162713.1-201ENST00000604480 262 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 RNA5SP108-201ENST00000605921 117 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 SNORD98-201ENST00000636377 67 ntBASIC4.54□□□□□ -1.68
ALDH1A1P00352 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 RNU6-309P-201ENST00000364573 106 ntBASIC4.53□□□□□ -1.68
ALDH1A1P00352 CBX3P9-201ENST00000402326 552 ntBASIC4.53□□□□□ -1.68
ALDH1A1P00352 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.53□□□□□ -1.68
ALDH1A1P00352 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.53□□□□□ -1.68
ALDH1A1P00352 HMGN2P30-201ENST00000423237 256 ntBASIC4.53□□□□□ -1.68
ALDH1A1P00352 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 SCARNA14-201ENST00000516903 136 ntBASIC4.53□□□□□ -1.68
ALDH1A1P00352 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.53□□□□□ -1.68
ALDH1A1P00352 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.53□□□□□ -1.68
ALDH1A1P00352 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
ALDH1A1P00352 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ALDH1A1P00352 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ALDH1A1P00352 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.52□□□□□ -1.69
ALDH1A1P00352 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ALDH1A1P00352 RNA5SP399-201ENST00000364003 117 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 TOMM22P1-201ENST00000418578 312 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 RPL39P40-201ENST00000445481 146 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 AC006445.2-201ENST00000510061 472 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 SNORA70.12-201ENST00000516084 153 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 SNORA31.8-201ENST00000516327 108 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 Y_RNA.685-201ENST00000516532 108 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 MIR3136-201ENST00000583498 78 ntBASIC4.52□□□□□ -1.69
ALDH1A1P00352 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ALDH1A1P00352 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
ALDH1A1P00352 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ALDH1A1P00352 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
ALDH1A1P00352 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ALDH1A1P00352 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.51□□□□□ -1.69
ALDH1A1P00352 RNU6-1280P-201ENST00000365211 107 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 RNU6-487P-201ENST00000365430 104 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 SNORD18B-201ENST00000365659 72 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 AP002088.1-201ENST00000382740 395 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 RNU6-1279P-201ENST00000383917 103 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 RNU6-756P-201ENST00000383997 107 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 RNU6-484P-201ENST00000384016 107 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 BX510359.1-201ENST00000456973 237 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.51□□□□□ -1.69
ALDH1A1P00352 SNORD105B-201ENST00000458770 79 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 RN7SL807P-201ENST00000470923 297 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 AL160236.1-201ENST00000556317 195 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.51□□□□□ -1.69
ALDH1A1P00352 AL451007.1-201ENST00000595491 289 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ALDH1A1P00352 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ALDH1A1P00352 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ALDH1A1P00352 AC087190.4-201ENST00000574616 8334 ntBASIC4.51□□□□□ -1.69
ALDH1A1P00352 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ALDH1A1P00352 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ALDH1A1P00352 RNU6-335P-201ENST00000364563 113 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 SNORA72-201ENST00000384339 132 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 Y_RNA.587-201ENST00000391210 103 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 RN7SKP101-201ENST00000411376 320 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 RPL21P10-201ENST00000463521 490 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 MIR3923-201ENST00000579521 83 ntBASIC4.5□□□□□ -1.69
ALDH1A1P00352 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ALDH1A1P00352 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ALDH1A1P00352 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ALDH1A1P00352 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ALDH1A1P00352 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms