Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC090517.1-201ENST00000569307 266 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 AP005136.1-201ENST00000579765 429 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 AC073648.5-201ENST00000603502 305 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 AC087752.4-201ENST00000605911 462 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 MIR6734-201ENST00000621166 68 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 SNORA43.4-201ENST00000629559 138 ntBASIC1.45□□□□□ -2.18
CLDN9O95484 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLDN9O95484 RNU5A-6P-201ENST00000384136 116 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 RNU6-1026P-201ENST00000384465 108 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLDN9O95484 RNU6-1106P-201ENST00000390845 107 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CLDN9O95484 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AP000275.1-201ENST00000411943 390 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN9O95484 AL513185.2-201ENST00000425543 193 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CLDN9O95484 MTCO3P46-201ENST00000425787 232 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AL121601.2-201ENST00000438019 707 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 MTND4LP16-201ENST00000440828 295 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.44□□□□□ -2.18
CLDN9O95484 RNU6-956P-201ENST00000458868 103 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.44□□□□□ -2.18
CLDN9O95484 AC021146.2-201ENST00000504736 556 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 RPL39P5-202ENST00000512505 151 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 MTND4P7-201ENST00000523876 130 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.44□□□□□ -2.18
CLDN9O95484 AC090115.3-201ENST00000553218 849 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN9O95484 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN9O95484 MIR6504-201ENST00000613520 61 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 MIR8074-201ENST00000615081 81 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
CLDN9O95484 AC005609.4-201ENST00000625071 447 ntBASIC1.44□□□□□ -2.18
CLDN9O95484 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN9O95484 SNORD114-26-201ENST00000363543 72 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 RNU6-112P-201ENST00000363599 104 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 RNA5SP325-201ENST00000363756 130 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 Y_RNA.381-201ENST00000365666 102 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AL606923.1-201ENST00000406616 190 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 RNU7-138P-201ENST00000459479 64 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AC007547.1-201ENST00000462177 490 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 CCDC34P1-201ENST00000507441 517 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AC025465.3-201ENST00000510570 311 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN9O95484 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN9O95484 AL391646.1-201ENST00000603860 190 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 HULC.1-201ENST00000612720 240 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AC083806.3-201ENST00000614016 455 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 AL354950.2-201ENST00000617939 290 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 MTND5P9-201ENST00000503854 1755 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN9O95484 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
CLDN9O95484 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN9O95484 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 SNORD31B-201ENST00000364977 69 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.42□□□□□ -2.18
CLDN9O95484 AC012306.1-201ENST00000423267 114 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 MTCO2P3-201ENST00000442543 421 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AC087477.1-201ENST00000465747 340 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AL163973.1-201ENST00000484753 577 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.42□□□□□ -2.18
CLDN9O95484 HMGB1P33-201ENST00000563485 527 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AC008088.1-201ENST00000580993 280 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.42□□□□□ -2.18
CLDN9O95484 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AC009994.1-201ENST00000606889 253 ntBASIC1.42□□□□□ -2.18
CLDN9O95484 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN9O95484 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.42□□□□□ -2.18
CLDN9O95484 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLDN9O95484 AL159152.1-201ENST00000635019 2587 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 Y_RNA.191-201ENST00000363972 113 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 SNORA75-201ENST00000384158 137 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 U8.10-201ENST00000384260 133 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN9O95484 MTCO2P19-201ENST00000427513 598 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN9O95484 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN9O95484 AC016925.1-201ENST00000458303 298 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN9O95484 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC007834.2-201ENST00000536310 343 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.41□□□□□ -2.18
CLDN9O95484 AC015720.1-201ENST00000565251 277 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC064807.4-201ENST00000607201 407 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AC008147.4-201ENST00000617570 1204 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 AL136221.1-201ENST00000621449 509 ntBASIC1.41□□□□□ -2.18
CLDN9O95484 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN9O95484 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN9O95484 RNU1-76P-201ENST00000362903 159 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms