Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR8054-201ENST00000620877 86 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 SNORD32B-201ENST00000364460 84 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 MTCYBP2-201ENST00000407745 171 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
ABCA1O95477 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA1O95477 AC010531.2-201ENST00000465012 153 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC104692.1-201ENST00000472406 90 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RNU6-150P-201ENST00000516237 95 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.13□□□□□ -2.39
ABCA1O95477 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA1O95477 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.13□□□□□ -2.39
ABCA1O95477 AC009509.4-201ENST00000619202 509 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC068647.2-201ENST00000637380 353 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
ABCA1O95477 RNU4-15P-201ENST00000362613 141 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
ABCA1O95477 MIR544A-201ENST00000384855 91 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 RPS20P2-201ENST00000402520 389 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 MIR1185-1-201ENST00000408598 86 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 MTCO1P17-201ENST00000411522 491 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA1O95477 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA1O95477 AL008629.1-201ENST00000438615 184 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA1O95477 RNU6-677P-201ENST00000516914 101 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 MTND1P36-201ENST00000522384 936 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC025678.1-201ENST00000567861 338 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AL162424.1-201ENST00000602325 221 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC098483.2-201ENST00000603158 454 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AL357312.1-201ENST00000603879 298 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 CTHRC1P1-201ENST00000605383 469 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC104073.3-201ENST00000610942 955 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC116165.2-201ENST00000616705 206 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA1O95477 RNU4-79P-201ENST00000362764 141 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 RNU4-48P-201ENST00000365559 182 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 MIR19A-201ENST00000384878 82 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 RNA5SP111-201ENST00000411386 101 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA1O95477 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA1O95477 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA1O95477 RPL23AP30-201ENST00000432419 501 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC007969.2-201ENST00000441891 191 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 SNRPEP8-201ENST00000442866 260 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA1O95477 RPL39P39-201ENST00000455840 151 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 AC098869.1-201ENST00000481627 292 ntBASIC0.12□□□□□ -2.39
ABCA1O95477 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 SMIM11P1-201ENST00000369586 178 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-39P-201ENST00000384344 107 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 SNORA12.2-201ENST00000391040 156 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 BET1P1-201ENST00000482276 359 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA1O95477 DEFB130C-202ENST00000530001 230 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AC013244.3-201ENST00000605614 388 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 FRG1KP-201ENST00000623592 341 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-1285P-201ENST00000363480 105 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-777P-201ENST00000364265 104 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-163P-201ENST00000384396 106 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-1067P-201ENST00000384752 107 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RPS3AP1-201ENST00000413190 320 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RPL22P18-201ENST00000417197 377 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 MRPS18CP6-201ENST00000423587 223 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AL356583.2-201ENST00000426536 280 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RPL17P35-201ENST00000432217 549 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.11□□□□□ -2.39
ABCA1O95477 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.11□□□□□ -2.39
ABCA1O95477 AC106038.2-201ENST00000520706 568 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA1O95477 VN1R87P-201ENST00000596706 487 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AC012409.4-201ENST00000612923 249 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.11□□□□□ -2.39
ABCA1O95477 AC100810.6-201ENST00000638068 285 ntBASIC0.11□□□□□ -2.39
ABCA1O95477 RNU6-969P-201ENST00000383900 105 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 RNU6-45P-201ENST00000384471 107 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MIR10A-201ENST00000385043 110 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA1O95477 Y_RNA.700-201ENST00000516806 100 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA1O95477 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.1□□□□□ -2.39
ABCA1O95477 AC090517.1-201ENST00000569307 266 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MIR5695-201ENST00000579717 85 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MIR3146-201ENST00000580367 79 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MIR4493-201ENST00000584016 73 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 LARP7P1-201ENST00000605576 316 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA1O95477 RNU6-562P-201ENST00000362731 107 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 Y_RNA.132-201ENST00000363421 102 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 MIR558-201ENST00000384920 94 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 HMGN2P34-201ENST00000437647 269 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 RNU7-21P-201ENST00000459430 62 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA1O95477 RPL23AP54-201ENST00000495129 419 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 CYCTP-201ENST00000504253 315 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 AC112206.3-201ENST00000514578 389 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 SNORA43.2-201ENST00000516652 128 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms