Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 MIR3941-201ENST00000582572 103 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 SNRPGP17-201ENST00000603780 214 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC007792.1-201ENST00000623023 402 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC139792.2-201ENST00000624218 587 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL450472.1-202ENST00000637286 180 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CTDNEP1O95476 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC121333.1-201ENST00000567488 2709 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 ERLEC1P1-201ENST00000433806 578 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC092436.3-201ENST00000511788 257 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 SNORA31.16-201ENST00000516773 139 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 SNORD60.2-201ENST00000516883 86 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC069113.1-201ENST00000517763 267 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 RNU6-323P-201ENST00000521915 107 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC090821.2-201ENST00000523552 176 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC104576.1-201ENST00000524225 88 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 VN1R107P-201ENST00000601784 209 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 ELOCP5-201ENST00000604924 333 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AL357078.3-201ENST00000607528 618 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC090517.2-201ENST00000614966 680 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC063943.3-201ENST00000615562 356 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 AC090517.3-201ENST00000625170 141 ntBASIC1.48□□□□□ -2.17
CTDNEP1O95476 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.48□□□□□ -2.17
CTDNEP1O95476 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CTDNEP1O95476 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CTDNEP1O95476 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 RNU4-15P-201ENST00000362613 141 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RNY4P14-201ENST00000363656 96 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 Y_RNA.450-201ENST00000384198 113 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 SNORA36A-201ENST00000384221 132 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RNU6-1148P-201ENST00000410992 104 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 RPL23AP95-201ENST00000426806 265 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RPS15AP10-201ENST00000432472 382 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 MTCO2P3-201ENST00000442543 421 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 RN7SKP210-201ENST00000459176 261 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RNU7-66P-201ENST00000459469 62 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 RPS29P27-201ENST00000463711 170 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 SNRPGP7-201ENST00000469016 106 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 SNORA19.2-201ENST00000516013 114 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 MTND1P35-201ENST00000526739 508 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 AP001836.1-201ENST00000604675 523 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.47□□□□□ -2.17
CTDNEP1O95476 DISC2.1-201ENST00000612827 205 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 SNORA43.4-201ENST00000629559 138 ntBASIC1.47□□□□□ -2.17
CTDNEP1O95476 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CTDNEP1O95476 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 RNU6-1141P-201ENST00000364520 107 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 RNU6-1329P-201ENST00000365664 107 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 Y_RNA.402-201ENST00000383972 102 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 RNU6-332P-201ENST00000391193 108 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 RPS29P25-201ENST00000481709 171 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC079140.5-201ENST00000507882 310 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC096745.1-201ENST00000509945 370 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 RNU6-965P-201ENST00000516721 96 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC109635.3-201ENST00000529536 185 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
CTDNEP1O95476 TRAV32-201ENST00000553993 340 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 MIR4713-201ENST00000582691 75 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CTDNEP1O95476 AL132822.1-201ENST00000617063 513 ntBASIC1.46□□□□□ -2.18
CTDNEP1O95476 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.45□□□□□ -2.18
CTDNEP1O95476 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RNU6-1252P-201ENST00000363054 104 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RNU6-254P-201ENST00000363377 107 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RNU6-534P-201ENST00000364877 106 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms