Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-970P-201ENST00000516312 107 ntBASIC4.71□□□□□ -1.66
RNF40O75150 RNU6-158P-201ENST00000517104 100 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF40O75150 AC007751.1-201ENST00000529260 376 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF40O75150 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF40O75150 AC007224.1-201ENST00000564410 144 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC105137.2-201ENST00000569073 466 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC105245.1-201ENST00000581934 244 ntBASIC4.71□□□□□ -1.66
RNF40O75150 RPS15AP11-201ENST00000594193 385 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC069200.1-201ENST00000609511 323 ntBASIC4.71□□□□□ -1.66
RNF40O75150 AC114781.5-201ENST00000615297 108 ntBASIC4.71□□□□□ -1.66
RNF40O75150 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.71□□□□□ -1.66
RNF40O75150 MIR4727-201ENST00000622232 55 ntBASIC4.71□□□□□ -1.66
RNF40O75150 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF40O75150 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
RNF40O75150 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF40O75150 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF40O75150 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF40O75150 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RNF40O75150 AP003122.5-201ENST00000527668 3766 ntBASIC4.7□□□□□ -1.66
RNF40O75150 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF40O75150 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF40O75150 Y_RNA.219-201ENST00000364232 113 ntBASIC4.7□□□□□ -1.66
RNF40O75150 SNORA7.2-201ENST00000364446 145 ntBASIC4.7□□□□□ -1.66
RNF40O75150 RNU6-820P-201ENST00000384273 107 ntBASIC4.7□□□□□ -1.66
RNF40O75150 MIR659-201ENST00000384963 97 ntBASIC4.7□□□□□ -1.66
RNF40O75150 RNA5SP136-201ENST00000410906 107 ntBASIC4.7□□□□□ -1.66
RNF40O75150 AF228730.3-201ENST00000436691 102 ntBASIC4.7□□□□□ -1.66
RNF40O75150 RN7SL303P-201ENST00000469773 251 ntBASIC4.7□□□□□ -1.66
RNF40O75150 RPS26P15-201ENST00000488067 348 ntBASIC4.7□□□□□ -1.66
RNF40O75150 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.7□□□□□ -1.66
RNF40O75150 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF40O75150 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF40O75150 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF40O75150 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF40O75150 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF40O75150 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF40O75150 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF40O75150 SNORD78.1-201ENST00000390866 65 ntBASIC4.69□□□□□ -1.66
RNF40O75150 MTATP6P21-201ENST00000440681 189 ntBASIC4.69□□□□□ -1.66
RNF40O75150 AL161651.1-201ENST00000440882 223 ntBASIC4.69□□□□□ -1.66
RNF40O75150 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF40O75150 SNORD11-201ENST00000459124 84 ntBASIC4.69□□□□□ -1.66
RNF40O75150 RPL23AP62-201ENST00000463396 453 ntBASIC4.69□□□□□ -1.66
RNF40O75150 HMGN2P9-201ENST00000476875 229 ntBASIC4.69□□□□□ -1.66
RNF40O75150 COX6CP6-201ENST00000490840 228 ntBASIC4.69□□□□□ -1.66
RNF40O75150 RNU6-365P-201ENST00000517113 106 ntBASIC4.69□□□□□ -1.66
RNF40O75150 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.69□□□□□ -1.66
RNF40O75150 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF40O75150 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF40O75150 uc_338.4-201ENST00000616635 176 ntBASIC4.69□□□□□ -1.66
RNF40O75150 AC134878.1-201ENST00000619901 243 ntBASIC4.69□□□□□ -1.66
RNF40O75150 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF40O75150 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF40O75150 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF40O75150 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF40O75150 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF40O75150 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF40O75150 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF40O75150 AL356292.1-201ENST00000283110 373 ntBASIC4.68□□□□□ -1.66
RNF40O75150 RNU1-63P-201ENST00000383902 164 ntBASIC4.68□□□□□ -1.66
RNF40O75150 RNU6-1113P-201ENST00000384348 107 ntBASIC4.68□□□□□ -1.66
RNF40O75150 MIR124-3-201ENST00000384866 87 ntBASIC4.68□□□□□ -1.66
RNF40O75150 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RNF40O75150 RPL23AP48-201ENST00000406913 488 ntBASIC4.68□□□□□ -1.66
RNF40O75150 RPS29P17-201ENST00000430795 166 ntBASIC4.68□□□□□ -1.66
RNF40O75150 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF40O75150 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF40O75150 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF40O75150 RPS3P1-201ENST00000456781 192 ntBASIC4.68□□□□□ -1.66
RNF40O75150 SNORA31.9-201ENST00000516429 84 ntBASIC4.68□□□□□ -1.66
RNF40O75150 SNORA18.4-201ENST00000516440 124 ntBASIC4.68□□□□□ -1.66
RNF40O75150 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF40O75150 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF40O75150 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF40O75150 ZNF962P-201ENST00000443465 3140 ntBASIC4.68□□□□□ -1.66
RNF40O75150 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF40O75150 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF40O75150 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RNF40O75150 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF40O75150 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF40O75150 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF40O75150 RNA5SP388-201ENST00000362584 119 ntBASIC4.67□□□□□ -1.66
RNF40O75150 Y_RNA.66-201ENST00000362862 102 ntBASIC4.67□□□□□ -1.66
RNF40O75150 SNORA70C-201ENST00000384538 135 ntBASIC4.67□□□□□ -1.66
RNF40O75150 MIR450A2-201ENST00000385022 100 ntBASIC4.67□□□□□ -1.66
RNF40O75150 AC011998.1-201ENST00000433403 117 ntBASIC4.67□□□□□ -1.66
RNF40O75150 RPL23AP93-201ENST00000440847 484 ntBASIC4.67□□□□□ -1.66
RNF40O75150 AC109327.2-201ENST00000448339 378 ntBASIC4.67□□□□□ -1.66
RNF40O75150 AL645939.1-201ENST00000453429 797 ntBASIC4.67□□□□□ -1.66
RNF40O75150 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF40O75150 RN7SL585P-201ENST00000470538 280 ntBASIC4.67□□□□□ -1.66
RNF40O75150 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF40O75150 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF40O75150 VN1R85P-201ENST00000601587 426 ntBASIC4.67□□□□□ -1.66
RNF40O75150 RNU6-91P-201ENST00000607774 107 ntBASIC4.67□□□□□ -1.66
RNF40O75150 ZYXP1-201ENST00000617638 118 ntBASIC4.67□□□□□ -1.66
RNF40O75150 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF40O75150 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms