Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL139396.1-201ENST00000421137 167 ntBASIC1.93□□□□□ -2.1
CDX4O14627 AC027124.2-201ENST00000428249 105 ntBASIC1.93□□□□□ -2.1
CDX4O14627 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.93□□□□□ -2.1
CDX4O14627 AC011753.1-201ENST00000451001 220 ntBASIC1.93□□□□□ -2.1
CDX4O14627 CYP2C59P-201ENST00000457790 269 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RPL36AP21-201ENST00000490372 323 ntBASIC1.93□□□□□ -2.1
CDX4O14627 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
CDX4O14627 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX4O14627 SMURF2P1-201ENST00000514992 481 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-559P-201ENST00000516151 98 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-1153P-201ENST00000516760 105 ntBASIC1.93□□□□□ -2.1
CDX4O14627 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX4O14627 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX4O14627 AC090897.2-201ENST00000581715 130 ntBASIC1.93□□□□□ -2.1
CDX4O14627 SNORD14A-201ENST00000606526 91 ntBASIC1.93□□□□□ -2.1
CDX4O14627 AL050343.2-201ENST00000607338 280 ntBASIC1.93□□□□□ -2.1
CDX4O14627 MIR6128-201ENST00000615528 109 ntBASIC1.93□□□□□ -2.1
CDX4O14627 MIR5739-201ENST00000619803 80 ntBASIC1.93□□□□□ -2.1
CDX4O14627 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDX4O14627 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.93□□□□□ -2.1
CDX4O14627 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CDX4O14627 Z82209.1-201ENST00000422141 2135 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
CDX4O14627 Y_RNA.394-201ENST00000383942 103 ntBASIC1.92□□□□□ -2.1
CDX4O14627 U8.10-201ENST00000384260 133 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RNU6-622P-201ENST00000384272 103 ntBASIC1.92□□□□□ -2.1
CDX4O14627 Y_RNA.473-201ENST00000384333 102 ntBASIC1.92□□□□□ -2.1
CDX4O14627 MIR144-201ENST00000384886 86 ntBASIC1.92□□□□□ -2.1
CDX4O14627 MIR524-201ENST00000385242 87 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RN7SKP158-201ENST00000410453 326 ntBASIC1.92□□□□□ -2.1
CDX4O14627 SNORD56-201ENST00000413522 71 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.92□□□□□ -2.1
CDX4O14627 MTND1P14-201ENST00000427400 950 ntBASIC1.92□□□□□ -2.1
CDX4O14627 SNAP23P1-201ENST00000433229 246 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AL031274.1-201ENST00000450334 232 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RNU7-187P-201ENST00000458985 68 ntBASIC1.92□□□□□ -2.1
CDX4O14627 Y_RNA.635-201ENST00000459041 101 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AC073901.1-201ENST00000462471 408 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AC096745.1-201ENST00000509945 370 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RPL39P5-202ENST00000512505 151 ntBASIC1.92□□□□□ -2.1
CDX4O14627 TRMT112P2-201ENST00000512910 132 ntBASIC1.92□□□□□ -2.1
CDX4O14627 RNA5SP82-201ENST00000516707 92 ntBASIC1.92□□□□□ -2.1
CDX4O14627 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.92□□□□□ -2.1
CDX4O14627 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.92□□□□□ -2.1
CDX4O14627 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CDX4O14627 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
CDX4O14627 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.92□□□□□ -2.1
CDX4O14627 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.92□□□□□ -2.1
CDX4O14627 AL359821.1-201ENST00000605519 182 ntBASIC1.92□□□□□ -2.1
CDX4O14627 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.91□□□□□ -2.1
CDX4O14627 Y_RNA.40-201ENST00000362645 93 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNU6-529P-201ENST00000363383 104 ntBASIC1.91□□□□□ -2.1
CDX4O14627 Y_RNA.151-201ENST00000363566 112 ntBASIC1.91□□□□□ -2.1
CDX4O14627 Y_RNA.259-201ENST00000364619 101 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
CDX4O14627 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CDX4O14627 SNORD116-29-201ENST00000384516 83 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNU6-306P-201ENST00000384617 107 ntBASIC1.91□□□□□ -2.1
CDX4O14627 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDX4O14627 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNU2-23P-201ENST00000410545 195 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNU6-370P-201ENST00000411008 104 ntBASIC1.91□□□□□ -2.1
CDX4O14627 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.91□□□□□ -2.1
CDX4O14627 AC245517.4-201ENST00000448601 281 ntBASIC1.91□□□□□ -2.1
CDX4O14627 SNORA25.11-201ENST00000515935 105 ntBASIC1.91□□□□□ -2.1
CDX4O14627 SNORA31.11-201ENST00000516528 139 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RNU6-1213P-201ENST00000517075 94 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.91□□□□□ -2.1
CDX4O14627 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.91□□□□□ -2.1
CDX4O14627 APOOP3-201ENST00000536787 586 ntBASIC1.91□□□□□ -2.1
CDX4O14627 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC100830.2-201ENST00000581636 240 ntBASIC1.91□□□□□ -2.1
CDX4O14627 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.91□□□□□ -2.1
CDX4O14627 VN1R107P-201ENST00000601784 209 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AL356055.1-201ENST00000602528 446 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AL133255.1-201ENST00000606374 441 ntBASIC1.91□□□□□ -2.1
CDX4O14627 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDX4O14627 AC245884.12-201ENST00000615364 59 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC084781.2-201ENST00000615568 161 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC008121.3-201ENST00000618726 433 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC090574.1-201ENST00000623186 233 ntBASIC1.91□□□□□ -2.1
CDX4O14627 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CDX4O14627 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
CDX4O14627 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.91□□□□□ -2.1
CDX4O14627 RNU6-428P-201ENST00000362942 107 ntBASIC1.9□□□□□ -2.11
CDX4O14627 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
CDX4O14627 SNORA3A-201ENST00000364113 130 ntBASIC1.9□□□□□ -2.11
CDX4O14627 RNU6-827P-201ENST00000365553 106 ntBASIC1.9□□□□□ -2.11
CDX4O14627 RNU6-601P-201ENST00000384540 107 ntBASIC1.9□□□□□ -2.11
CDX4O14627 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.9□□□□□ -2.11
CDX4O14627 UBE2V1P4-201ENST00000425374 344 ntBASIC1.9□□□□□ -2.11
CDX4O14627 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.9□□□□□ -2.11
CDX4O14627 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
CDX4O14627 SNORD19B-201ENST00000459623 84 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AP001025.1-201ENST00000486139 332 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AC140059.1-201ENST00000489238 361 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms