Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA40.15-201ENST00000516884 107 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 MIR4765-201ENST00000585007 77 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM38O00635 MIR7515-201ENST00000637837 67 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 U6.104-201ENST00000637979 90 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM38O00635 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM38O00635 AC002543.1-201ENST00000299783 1954 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
TRIM38O00635 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM38O00635 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TRIM38O00635 SNORD56.1-201ENST00000362913 68 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 RNU6-428P-201ENST00000362942 107 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 RNU6-280P-201ENST00000364145 104 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM38O00635 AC009296.1-201ENST00000443146 155 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 AC098869.1-201ENST00000481627 292 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM38O00635 RNU6-255P-201ENST00000516957 105 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM38O00635 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM38O00635 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM38O00635 MIR3133-201ENST00000583157 78 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 AL356157.2-201ENST00000605122 111 ntBASIC3.02□□□□□ -1.93
TRIM38O00635 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM38O00635 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM38O00635 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM38O00635 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM38O00635 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM38O00635 Y_RNA.29-201ENST00000362570 113 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 RNY1P16-201ENST00000363063 111 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 SNORD114-19-201ENST00000363072 75 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 SNORD67-201ENST00000390833 111 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 EEF1A1P41-201ENST00000414667 207 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 CYCSP48-201ENST00000417124 323 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM38O00635 RPS15AP7-201ENST00000439294 405 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM38O00635 PCMTD1P1-201ENST00000455560 355 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM38O00635 U8.21-201ENST00000459536 136 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 RPS29P26-201ENST00000477483 171 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 RPL36AP48-201ENST00000485521 314 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM38O00635 SNORA31.18-201ENST00000517043 134 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM38O00635 AC103996.1-201ENST00000555468 102 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC105137.2-201ENST00000569073 466 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 VN1R91P-201ENST00000594377 169 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM38O00635 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC073410.2-201ENST00000603240 332 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 MIR1244-1-201ENST00000612829 85 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 MIR1244-3-201ENST00000635744 85 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 MIR1244-2-201ENST00000636449 85 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 MIR1244-4-202ENST00000636813 85 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM38O00635 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM38O00635 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TRIM38O00635 AC026241.1-201ENST00000517873 2142 ntBASIC3.01□□□□□ -1.93
TRIM38O00635 AC108206.1-201ENST00000570186 4159 ntBASIC3□□□□□ -1.93
TRIM38O00635 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM38O00635 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
TRIM38O00635 RNU4-50P-201ENST00000364361 141 ntBASIC3□□□□□ -1.93
TRIM38O00635 Y_RNA.270-201ENST00000364693 104 ntBASIC3□□□□□ -1.93
TRIM38O00635 Y_RNA.291-201ENST00000364886 113 ntBASIC3□□□□□ -1.93
TRIM38O00635 Y_RNA.297-201ENST00000364950 91 ntBASIC3□□□□□ -1.93
TRIM38O00635 RNU6-596P-201ENST00000365395 98 ntBASIC3□□□□□ -1.93
TRIM38O00635 MIR215-201ENST00000384858 110 ntBASIC3□□□□□ -1.93
TRIM38O00635 RNU6-1203P-201ENST00000410703 110 ntBASIC3□□□□□ -1.93
TRIM38O00635 RNU2-25P-201ENST00000411041 191 ntBASIC3□□□□□ -1.93
TRIM38O00635 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
TRIM38O00635 AC022018.1-201ENST00000430685 241 ntBASIC3□□□□□ -1.93
TRIM38O00635 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3□□□□□ -1.93
TRIM38O00635 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3□□□□□ -1.93
TRIM38O00635 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
TRIM38O00635 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
TRIM38O00635 TRAV32-201ENST00000553993 340 ntBASIC3□□□□□ -1.93
TRIM38O00635 AC127459.3-201ENST00000624328 466 ntBASIC3□□□□□ -1.93
TRIM38O00635 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3□□□□□ -1.93
TRIM38O00635 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM38O00635 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM38O00635 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM38O00635 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM38O00635 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM38O00635 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM38O00635 RNU6-1159P-201ENST00000362933 107 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 Y_RNA.84-201ENST00000363011 104 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 RNY1-201ENST00000364228 113 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 Y_RNA.237-201ENST00000364439 102 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 RNU6-708P-201ENST00000384217 107 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 RNU6-662P-201ENST00000384253 104 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms