Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC7O00311 AC087477.1-201ENST00000465747 340 ntBASIC1.33□□□□□ -2.2
CDC7O00311 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
CDC7O00311 CCDC34P1-201ENST00000507441 517 ntBASIC1.33□□□□□ -2.2
CDC7O00311 AC025465.3-201ENST00000510570 311 ntBASIC1.33□□□□□ -2.2
CDC7O00311 RPL39P5-202ENST00000512505 151 ntBASIC1.33□□□□□ -2.2
CDC7O00311 RNU5F-4P-201ENST00000516581 114 ntBASIC1.33□□□□□ -2.2
CDC7O00311 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
CDC7O00311 AP003033.1-201ENST00000527244 415 ntBASIC1.33□□□□□ -2.2
CDC7O00311 AC090115.3-201ENST00000553218 849 ntBASIC1.33□□□□□ -2.2
CDC7O00311 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC7O00311 AC090517.1-201ENST00000569307 266 ntBASIC1.33□□□□□ -2.2
CDC7O00311 MIR3941-201ENST00000582572 103 ntBASIC1.33□□□□□ -2.2
CDC7O00311 AC009994.1-201ENST00000606889 253 ntBASIC1.33□□□□□ -2.2
CDC7O00311 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.33□□□□□ -2.2
CDC7O00311 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC7O00311 AC068205.3-201ENST00000636385 468 ntBASIC1.33□□□□□ -2.2
CDC7O00311 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC7O00311 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC7O00311 Y_RNA.122-201ENST00000363331 96 ntBASIC1.32□□□□□ -2.2
CDC7O00311 SNORD31B-201ENST00000364977 69 ntBASIC1.32□□□□□ -2.2
CDC7O00311 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
CDC7O00311 RNU6-996P-201ENST00000365438 107 ntBASIC1.32□□□□□ -2.2
CDC7O00311 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
CDC7O00311 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CDC7O00311 MIR208B-201ENST00000401172 77 ntBASIC1.32□□□□□ -2.2
CDC7O00311 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC7O00311 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC7O00311 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AC073415.1-201ENST00000449240 153 ntBASIC1.32□□□□□ -2.2
CDC7O00311 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC7O00311 AC016925.1-201ENST00000458303 298 ntBASIC1.32□□□□□ -2.2
CDC7O00311 RPL31P3-201ENST00000458430 332 ntBASIC1.32□□□□□ -2.2
CDC7O00311 MTCYBP18-201ENST00000501056 747 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AC098862.1-201ENST00000504991 413 ntBASIC1.32□□□□□ -2.2
CDC7O00311 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC7O00311 Y_RNA.695-201ENST00000516715 107 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC7O00311 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC7O00311 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CDC7O00311 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC7O00311 NIFKP6-201ENST00000598115 845 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AL391646.1-201ENST00000603860 190 ntBASIC1.32□□□□□ -2.2
CDC7O00311 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC7O00311 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CDC7O00311 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC7O00311 RNU1-76P-201ENST00000362903 159 ntBASIC1.31□□□□□ -2.2
CDC7O00311 Y_RNA.116-201ENST00000363292 103 ntBASIC1.31□□□□□ -2.2
CDC7O00311 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
CDC7O00311 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
CDC7O00311 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC7O00311 AL049545.1-201ENST00000401856 572 ntBASIC1.31□□□□□ -2.2
CDC7O00311 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC7O00311 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC7O00311 RPS29P29-201ENST00000456396 171 ntBASIC1.31□□□□□ -2.2
CDC7O00311 AC112492.4-201ENST00000456549 352 ntBASIC1.31□□□□□ -2.2
CDC7O00311 AC010531.2-201ENST00000465012 153 ntBASIC1.31□□□□□ -2.2
CDC7O00311 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC7O00311 AC114801.2-201ENST00000503825 781 ntBASIC1.31□□□□□ -2.2
CDC7O00311 ARL2BPP4-201ENST00000506854 471 ntBASIC1.31□□□□□ -2.2
CDC7O00311 RNU6-567P-201ENST00000516746 107 ntBASIC1.31□□□□□ -2.2
CDC7O00311 AP003034.1-201ENST00000534621 422 ntBASIC1.31□□□□□ -2.2
CDC7O00311 SNORA59B-202ENST00000578183 701 ntBASIC1.31□□□□□ -2.2
CDC7O00311 AC063944.3-201ENST00000609969 533 ntBASIC1.31□□□□□ -2.2
CDC7O00311 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC7O00311 AC005520.5-201ENST00000613926 164 ntBASIC1.31□□□□□ -2.2
CDC7O00311 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
CDC7O00311 uc_338.34-201ENST00000617467 174 ntBASIC1.31□□□□□ -2.2
CDC7O00311 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.31□□□□□ -2.2
CDC7O00311 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC7O00311 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
CDC7O00311 Y_RNA.381-201ENST00000365666 102 ntBASIC1.3□□□□□ -2.2
CDC7O00311 RNU6-1026P-201ENST00000384465 108 ntBASIC1.3□□□□□ -2.2
CDC7O00311 MIR518E-201ENST00000385252 88 ntBASIC1.3□□□□□ -2.2
CDC7O00311 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
CDC7O00311 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
CDC7O00311 RNA5SP219-201ENST00000390940 113 ntBASIC1.3□□□□□ -2.2
CDC7O00311 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC7O00311 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC7O00311 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
CDC7O00311 MTCO1P44-201ENST00000441935 243 ntBASIC1.3□□□□□ -2.2
CDC7O00311 RNU7-138P-201ENST00000459479 64 ntBASIC1.3□□□□□ -2.2
CDC7O00311 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
CDC7O00311 AL163973.1-201ENST00000484753 577 ntBASIC1.3□□□□□ -2.2
CDC7O00311 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.3□□□□□ -2.2
CDC7O00311 AP005597.4-201ENST00000526762 229 ntBASIC1.3□□□□□ -2.2
CDC7O00311 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC7O00311 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC7O00311 AC087752.4-201ENST00000605911 462 ntBASIC1.3□□□□□ -2.2
CDC7O00311 HULC.1-201ENST00000612720 240 ntBASIC1.3□□□□□ -2.2
CDC7O00311 AL158063.1-201ENST00000615349 536 ntBASIC1.3□□□□□ -2.2
CDC7O00311 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.3□□□□□ -2.2
CDC7O00311 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC7O00311 AC005609.4-201ENST00000625071 447 ntBASIC1.3□□□□□ -2.2
CDC7O00311 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC7O00311 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC7O00311 AL159152.1-201ENST00000635019 2587 ntBASIC1.29□□□□□ -2.2
CDC7O00311 SNORA75-201ENST00000384158 137 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms