Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 AC105137.2-201ENST00000569073 466 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 HMGB1P24-202ENST00000615653 685 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 ZNF72P-201ENST00000425869 1908 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.21□□□□□ -1.89
NR2E3Q9Y5X4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-874P-201ENST00000362390 105 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 SNORA9.2-201ENST00000365361 133 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-196P-201ENST00000384315 107 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 SNORA26.7-201ENST00000391288 122 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RN7SKP61-201ENST00000410642 295 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RPL39P29-201ENST00000447779 157 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AP001324.2-201ENST00000461163 319 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC010655.3-201ENST00000478818 450 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC109329.1-201ENST00000518744 317 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC023442.1-201ENST00000531247 422 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC016256.1-201ENST00000547971 354 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC008269.2-201ENST00000561915 1105 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC010205.1-201ENST00000616668 449 ntBASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NR2E3Q9Y5X4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 Y_RNA.193-201ENST00000363979 102 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 SNORA67.4-201ENST00000384688 142 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AL512633.1-201ENST00000399931 655 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AL133475.1-201ENST00000404414 305 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 CYCSP48-201ENST00000417124 323 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC078809.1-201ENST00000427601 140 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC096644.2-201ENST00000429278 159 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 RPL30P12-201ENST00000474666 353 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC015911.1-201ENST00000495111 156 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC016632.1-201ENST00000503994 196 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 MRPS36P2-201ENST00000512569 299 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 RN7SKP282-201ENST00000516824 299 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 MIR5188-201ENST00000583467 113 ntBASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
NR2E3Q9Y5X4 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC080128.1-201ENST00000474389 1917 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AP000560.1-201ENST00000624150 1937 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 SNORD114-19-201ENST00000363072 75 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-142P-201ENST00000384019 107 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC138623.1-201ENST00000418060 216 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MTCYBP10-201ENST00000424905 650 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RPL31P41-201ENST00000477967 372 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC104564.1-201ENST00000493028 407 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 RNA5SP148-201ENST00000516527 94 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC115990.1-201ENST00000526957 301 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 HSPE1P4-201ENST00000550617 308 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 AC060766.3-201ENST00000591442 263 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MIR1244-1-201ENST00000612829 85 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MIR7111-201ENST00000619751 72 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MIR1244-3-201ENST00000635744 85 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MIR1244-2-201ENST00000636449 85 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 MIR1244-4-202ENST00000636813 85 ntBASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NR2E3Q9Y5X4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR2E3Q9Y5X4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NR2E3Q9Y5X4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR2E3Q9Y5X4 AC092268.1-201ENST00000342691 405 ntBASIC3.18□□□□□ -1.9
NR2E3Q9Y5X4 Y_RNA.39-201ENST00000362620 98 ntBASIC3.18□□□□□ -1.9
NR2E3Q9Y5X4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms