Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-80P-201ENST00000384195 107 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RPS27P1-201ENST00000450552 247 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU7-115P-201ENST00000516433 55 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 AC011603.4-201ENST00000611325 277 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR767-201ENST00000390228 109 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP252-201ENST00000391131 119 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORA36B-201ENST00000410438 131 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 Z98742.2-201ENST00000431564 187 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 HMGN2P9-201ENST00000476875 229 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 AC117454.1-201ENST00000491120 168 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORA31.1-201ENST00000515993 133 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORA31.5-201ENST00000516190 133 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-1098P-201ENST00000516772 96 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR4753-201ENST00000585119 83 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 RPL30P11-203ENST00000598995 310 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 AL356218.2-201ENST00000605264 187 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 AP000346.3-201ENST00000622821 210 ntBASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA11Q9Y5H2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC02471-203ENST00000641941 4752 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU1-32P-201ENST00000363937 159 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 Z98941.1-201ENST00000407764 100 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 EIF4EP4-201ENST00000424916 578 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RPL23AP7-203ENST00000449021 469 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU7-57P-201ENST00000459540 60 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU4-57P-201ENST00000515980 135 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP49-201ENST00000516450 115 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-919P-201ENST00000516731 104 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-1234P-201ENST00000516877 103 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU7-116P-201ENST00000516940 62 ntBASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA11Q9Y5H2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP322-201ENST00000363617 119 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORA79-201ENST00000408376 140 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR1283-1-201ENST00000408494 87 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR1294-201ENST00000408503 142 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 RN7SL738P-201ENST00000470264 297 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 TOMM20P2-201ENST00000540082 421 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 AC090517.3-201ENST00000625170 141 ntBASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA11Q9Y5H2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-834P-201ENST00000362367 110 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 Y_RNA.393-201ENST00000383936 102 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP354-201ENST00000391247 136 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU4-43P-201ENST00000410628 137 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-383P-201ENST00000410864 94 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RPL37P18-201ENST00000411602 243 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AL035461.1-201ENST00000421490 332 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 HMGN2P31-201ENST00000432430 273 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms