Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 RNU4-13P-201ENST00000364019 141 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.203-201ENST00000364106 102 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 SNORD113.2-201ENST00000364166 89 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.366-201ENST00000365540 102 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 RNA5SP397-201ENST00000391323 118 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AC080013.2-201ENST00000460866 323 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 RN7SL41P-201ENST00000476144 297 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AC093249.4-201ENST00000564755 259 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AC015912.2-201ENST00000571053 181 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 HMGN2P15-201ENST00000585707 270 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AL356218.2-201ENST00000605264 187 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 AC112200.1-201ENST00000625015 234 ntBASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB3Q9Y5E6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 SNORA71.2-201ENST00000364941 134 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 HSPE1P12-201ENST00000412576 301 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 AL732292.1-201ENST00000426692 226 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 RPL27AP5-201ENST00000469428 449 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-126P-201ENST00000516685 103 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 RNU7-149P-201ENST00000516739 59 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 MIR3129-201ENST00000581095 76 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 VN1R85P-201ENST00000601587 426 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 RPL17P51-201ENST00000605218 238 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 AC002064.3-201ENST00000623448 346 ntBASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB3Q9Y5E6 AC026241.1-201ENST00000517873 2142 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RNY1P10-201ENST00000363268 113 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-1210P-201ENST00000363775 107 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-1138P-201ENST00000365359 106 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.362-201ENST00000365518 110 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.486-201ENST00000384398 107 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-813P-201ENST00000384691 107 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR181A2-201ENST00000384863 110 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR562-201ENST00000384894 95 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR129-1-201ENST00000384972 72 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR181B1-201ENST00000385240 110 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 Z98745.1-201ENST00000402553 494 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RNA5SP225-201ENST00000410874 135 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 RBMY2UP-201ENST00000453474 324 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 AC027419.1-201ENST00000522976 328 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR5009-201ENST00000578736 100 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR4662B-201ENST00000579498 81 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 MIR6830-201ENST00000636015 70 ntBASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB3Q9Y5E6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-228P-201ENST00000362700 106 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-1134P-201ENST00000365156 101 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 SNORA1-201ENST00000384107 130 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 MIR3065-201ENST00000390137 79 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RNU1-82P-201ENST00000390851 165 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AC245102.2-201ENST00000448956 180 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RNU7-57P-201ENST00000459540 60 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 OR9P1P-201ENST00000496431 281 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AC026421.1-201ENST00000519101 163 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AC012493.2-201ENST00000595083 291 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 HSPE1P7-201ENST00000604681 321 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AC107294.3-201ENST00000609211 526 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AL590808.1-201ENST00000618696 141 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 AC073308.1-201ENST00000623696 305 ntBASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
PCDHB3Q9Y5E6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 MFSD8-242ENST00000641690 4199 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 snoU2_19.1-201ENST00000362361 80 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms