Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1037P-201ENST00000459571 107 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 SNRPGP7-201ENST00000469016 106 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC016632.1-201ENST00000503994 196 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC091874.1-201ENST00000511402 339 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-720P-201ENST00000516363 108 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-323P-201ENST00000521915 107 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AL078605.1-201ENST00000603529 500 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC004492.1-201ENST00000607036 742 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AL357078.3-201ENST00000607528 618 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AF250324.2-201ENST00000608299 610 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC064836.2-201ENST00000609491 462 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AL121757.2-201ENST00000611223 313 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 DISC2.1-201ENST00000612827 205 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 FAM157A-202ENST00000615155 405 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 FER-210ENST00000628534 558 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR1248-201ENST00000629190 106 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 MTND4P23-201ENST00000447723 1363 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 RNU6-451P-201ENST00000362921 107 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 MIR29C-201ENST00000385231 88 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 RNU6-1106P-201ENST00000390845 107 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AL589823.1-201ENST00000429577 183 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AC008628.2-201ENST00000502605 298 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AC025423.5-201ENST00000550230 219 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AC078795.3-201ENST00000602913 472 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 AL773524.1-201ENST00000614065 229 ntBASIC1.52□□□□□ -2.17
TRAPPC4Q9Y296 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AL590002.1-201ENST00000406554 418 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 MIR1283-2-201ENST00000408621 87 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 RPS29P27-201ENST00000463711 170 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 PTP4A1P4-201ENST00000512479 322 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 RPL39P5-202ENST00000512505 151 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 Y_RNA.665-201ENST00000516177 98 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 RNU6-612P-201ENST00000516909 102 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC100830.2-201ENST00000581636 240 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC010525.2-201ENST00000590920 195 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC116312.1-201ENST00000606841 314 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC064807.4-201ENST00000607201 407 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC104458.1-201ENST00000608243 463 ntBASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAPPC4Q9Y296 Y_RNA.38-201ENST00000362617 102 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 Y_RNA.256-201ENST00000364594 104 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 RNU4-56P-201ENST00000364700 142 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 MIR504-201ENST00000385065 83 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 SNORA12-201ENST00000391162 147 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 MRPS10P2-201ENST00000431226 381 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 HMGN2P26-201ENST00000463169 339 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC132942.1-201ENST00000486753 483 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC096745.1-201ENST00000509945 370 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC092436.3-201ENST00000511788 257 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 SNORA25.15-201ENST00000516487 89 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 RNU6-314P-201ENST00000516574 104 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC104576.1-201ENST00000524225 88 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC109635.3-201ENST00000529536 185 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC016256.1-201ENST00000547971 354 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 SCOCP1-201ENST00000554676 349 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC021231.3-201ENST00000558497 370 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 TPRKBP2-201ENST00000565969 475 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 MIR3923-201ENST00000579521 83 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 AC005520.5-201ENST00000613926 164 ntBASIC1.5□□□□□ -2.17
TRAPPC4Q9Y296 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 RNU6-227P-201ENST00000362865 103 ntBASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 Y_RNA.504-201ENST00000384481 104 ntBASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 BTF3L4P2-201ENST00000392798 346 ntBASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAPPC4Q9Y296 AL358453.1-201ENST00000422522 250 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms