Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.41□□□□□ -2.18
CTSFQ9UBX1 AC078795.3-201ENST00000602913 472 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 AC073648.5-201ENST00000603502 305 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 AC012507.3-201ENST00000603556 477 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 RNU6-85P-201ENST00000605989 107 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 AC022513.1-201ENST00000624512 117 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 SNORA43.4-201ENST00000629559 138 ntBASIC1.41□□□□□ -2.18
CTSFQ9UBX1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.41□□□□□ -2.18
CTSFQ9UBX1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CTSFQ9UBX1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CTSFQ9UBX1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CTSFQ9UBX1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CTSFQ9UBX1 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.18
CTSFQ9UBX1 RNU6-1141P-201ENST00000364520 107 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 NCOR1P3-201ENST00000420479 303 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 RPL23AP95-201ENST00000426806 265 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 Z82205.1-201ENST00000428456 297 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC002486.1-201ENST00000435098 391 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AL163973.1-201ENST00000484753 577 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AK3P2-201ENST00000507976 429 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 ATP5EP1-201ENST00000510257 156 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 RNVU1-2-201ENST00000516326 135 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC115990.1-201ENST00000526957 301 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 HSPE1P4-201ENST00000550617 308 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 MTND1P15-201ENST00000579262 949 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC010620.1-201ENST00000601088 1102 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 RN7SKP299-201ENST00000606679 301 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC007684.1-201ENST00000609671 477 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 AC005609.4-201ENST00000625071 447 ntBASIC1.4□□□□□ -2.19
CTSFQ9UBX1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CTSFQ9UBX1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.1-201ENST00000352915 104 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.409-201ENST00000383990 98 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 RNU5A-6P-201ENST00000384136 116 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 SNORA12.2-201ENST00000391040 156 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 RNA5SP201-201ENST00000410316 124 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 RNU6-1245P-201ENST00000411130 106 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 AL663109.1-201ENST00000411498 844 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 HMGN2P18-201ENST00000450680 270 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 RPS3AP17-201ENST00000472594 777 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.688-201ENST00000516565 95 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 AL161670.1-201ENST00000554348 137 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 MIR3169-201ENST00000578032 83 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.39□□□□□ -2.19
CTSFQ9UBX1 AL590240.4-201ENST00000616908 390 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 uc_338.34-201ENST00000617467 174 ntBASIC1.39□□□□□ -2.19
CTSFQ9UBX1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU4-20P-201ENST00000365601 151 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU6-142P-201ENST00000384019 107 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU6-1119P-201ENST00000384349 108 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNA5SP219-201ENST00000390940 113 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 SNORA26.3-201ENST00000391119 136 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 MTCYBP2-201ENST00000407745 171 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RN7SKP61-201ENST00000410642 295 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AC022447.4-201ENST00000504053 364 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 HMGB1P29-201ENST00000505659 499 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AC025465.3-201ENST00000510570 311 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RN7SKP298-201ENST00000515950 94 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 SNORA40.12-201ENST00000516329 111 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AC087441.2-201ENST00000529141 262 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 VN1R107P-201ENST00000601784 209 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AP001836.1-201ENST00000604675 523 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 U2.17-201ENST00000611454 95 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 AC068792.1-201ENST00000621354 417 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
CTSFQ9UBX1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CTSFQ9UBX1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 RNA5SP493-201ENST00000364115 91 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.255-201ENST00000364581 97 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 RNU6-378P-201ENST00000384324 107 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.582-201ENST00000391023 95 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms