Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TUSC7.1-201ENST00000610969 165 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC131159.1-201ENST00000621854 213 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL391262.2-201ENST00000622466 494 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC091931.1-201ENST00000623488 728 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL157786.1-207ENST00000627771 695 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 SNORD98-201ENST00000636377 67 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC092268.1-201ENST00000342691 405 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 Y_RNA.132-201ENST00000363421 102 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MIR597-201ENST00000384968 97 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-607P-201ENST00000411283 108 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MTATP6P16-201ENST00000434543 526 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MTND2P4-201ENST00000445034 1004 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL162395.1-201ENST00000457882 422 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RPL30P7-201ENST00000479312 323 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC079140.3-201ENST00000511111 550 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-1220P-201ENST00000517126 108 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL391840.1-201ENST00000571144 367 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MIR5094-201ENST00000578766 85 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC069114.2-201ENST00000604699 304 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 Z84480.1-201ENST00000605131 311 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL133173.2-201ENST00000614270 90 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-271P-201ENST00000363858 105 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 SNORA22-201ENST00000383907 134 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RNU6-1274P-201ENST00000384557 107 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 SNORA22C-201ENST00000384614 134 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 PIGFP2-201ENST00000421400 651 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 MTND4LP16-201ENST00000440828 295 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC005908.1-201ENST00000468701 347 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 Y_RNA.672-201ENST00000516289 104 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 HMGB1P33-201ENST00000563485 527 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 NIFKP6-201ENST00000598115 845 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC105148.1-201ENST00000604961 409 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC068792.1-201ENST00000621354 417 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 Z69720.2-201ENST00000624755 279 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AL390237.1-201ENST00000404226 1415 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 Y_RNA.22-201ENST00000362492 102 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RNY4P16-201ENST00000364768 94 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RNU6-384P-201ENST00000364900 104 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RPS3AP3-201ENST00000411933 242 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RPL37P10-201ENST00000412884 288 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 HIGD1AP15-201ENST00000416198 280 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 MTCO1P21-201ENST00000416634 589 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 UBE2V1P8-201ENST00000437166 265 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RAP1BP2-201ENST00000478270 544 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AL163195.1-201ENST00000496941 348 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 Vault.3-201ENST00000516676 95 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 RNA5SP404-201ENST00000517118 132 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC023050.3-201ENST00000541142 333 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC012414.6-201ENST00000568241 401 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 MIR3923-201ENST00000579521 83 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 AC093424.1-201ENST00000604999 338 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCDC88CQ9P219 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.76□□□□□ -2.29
CCDC88CQ9P219 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC88CQ9P219 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCDC88CQ9P219 MIR26B-201ENST00000362251 77 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 SNORA40.3-201ENST00000390964 122 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 RNA5SP201-201ENST00000410316 124 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC002486.1-201ENST00000435098 391 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 RPS23P5-201ENST00000495419 428 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 RNA5SP337-201ENST00000517007 109 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 SNORA25.17-201ENST00000517184 124 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 MTCO2P4-201ENST00000517968 247 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC022616.3-201ENST00000523940 148 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.75□□□□□ -2.29
CCDC88CQ9P219 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC88CQ9P219 MIR4760-201ENST00000585040 80 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC090578.1-201ENST00000604955 591 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC138749.5-201ENST00000611461 208 ntBASIC0.75□□□□□ -2.29
CCDC88CQ9P219 AC005520.5-201ENST00000613926 164 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms